Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq723 86.0 7e-12 >seq723 Length=15614 Score = 86.0 bits (94), Expect = 7e-12 Identities = 203/300 (68%), Gaps = 5/300 (2%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCC-AAAGACATCGCCAATACTGAATCGCCTGGACT 6984 |||||||| |||||||| || || | ||| ||| ||| ||| | ||| || || | Sbjct 12631 CCATGTGTCAAATGACCTCC-CATTGATAAATCCATTCCCATTACGGTATCTCCAGGTTT 12573 Query 6985 CAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044 | | || | | |||| || || ||||||||||| ||||| || || ||||| || Sbjct 12572 TAATACCGAAAGATAAATGGCCGCATTGGCCTGTGAACCAGAATGCGGCTGTACGTTGGC 12513 Query 7045 GAAATTGCA-ACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGG 7103 | ||| | | || |||| ||| || | ||||| ||||| | || | || || Sbjct 12512 -ATATTCTACGCCGAAAAGTTGTTTTGCTCTTTCAATCGCCAGTGTTTCTACTTCGTCTA 12454 Query 7104 CTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAA 7163 | | ||||||| ||||| || | || ||||| || || || ||||| || || || | Sbjct 12453 CCACTTCACAACCTCCGTAGTATCTCTTACCTGGGTAGCCTTCTGCATATTTATTTGTTA 12394 Query 7164 AAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAAGC 7223 | | | || |||||||| || | ||| || ||| | ||||| |||||||| |||| Sbjct 12393 AGACACTTCCCATGGCTTTCATCACGTTATCAGAAACAAAATTTTCTGATGCAAT-AAGC 12335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553337372905680