Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq56 122 7e-23 seq337 116 3e-21 seq287 116 3e-21 seq114 113 4e-20 seq454 111 1e-19 seq13 102 7e-17 seq128 98.7 9e-16 seq507 96.9 3e-15 seq260 91.5 1e-13 >seq56 Length=265680 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||| ||||| || || ||||| | || || | || || || | Sbjct 113270 ATGTAAATTTTTGTTAAAACCTTGACGGGAAAGACTATCACACTTGATGTAGAACCTTCA 113329 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || || || |||||| || |||||||| || ||||| |||||| Sbjct 113330 GACACCATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCTCCTGATCAA 113389 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 | ||| |||||| | || |||||||| ||||||| |||| | ||||||||| Sbjct 113390 TAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGATGGAAGAACTCTTTCAGATTATAAC 113449 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| |||||||||| || |||||||||| || ||||| |||||||| Sbjct 113450 ATTTAAAAAGAATCAACTCTTCATTTAGTATTGAGATTAAGAGGAGG 113496 >seq337 Length=64228 Score = 116 bits (128), Expect = 3e-21 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| |||||| || | ||||| |||||| |||| |||||| | ||||| | || || || Sbjct 61306 AAAGAAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGA 61365 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || ||||| || ||| ||||| ||||| || || | Sbjct 61366 A-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 61424 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || | ||| Sbjct 61425 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 61484 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 | ||||||||| |||| ||||| || | || |||||||| ||||||||||| ||| | Sbjct 61485 --ACTATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAAT 61542 Query 24221 ATAA 24224 ||| Sbjct 61543 GTAA 61546 Score = 116 bits (128), Expect = 3e-21 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| |||||| || | ||||| |||||| |||| |||||| | ||||| | || || || Sbjct 63078 AAAGAAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGA 63137 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || ||||| || ||| ||||| ||||| || || | Sbjct 63138 A-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 63196 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || | ||| Sbjct 63197 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 63256 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 | ||||||||| |||| ||||| || | || |||||||| ||||||||||| ||| | Sbjct 63257 --ACTATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAAT 63314 Query 24221 ATAA 24224 ||| Sbjct 63315 GTAA 63318 >seq287 Length=75303 Score = 116 bits (128), Expect = 3e-21 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| |||||| || | ||||| |||||| |||| |||||| | ||||| | || || || Sbjct 522 AAAGAAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGA 581 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || ||||| || ||| ||||| ||||| || || | Sbjct 582 A-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 640 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || | ||| Sbjct 641 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 700 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 | ||||||||| |||| ||||| || | || |||||||| ||||||||||| ||| | Sbjct 701 --ACTATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAAT 758 Query 24221 ATAA 24224 ||| Sbjct 759 GTAA 762 Score = 116 bits (128), Expect = 3e-21 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| |||||| || | ||||| |||||| |||| |||||| | ||||| | || || || Sbjct 2533 AAAGAAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGA 2592 Query 24044 GGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 ||| | ||||| || || ||||| || ||| ||||| ||||| || || | Sbjct 2593 A-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 2651 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAG 24160 | ||| || | ||||| |||| | || ||| || | ||||||| |||| || | ||| Sbjct 2652 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 2711 Query 24161 CGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACT 24220 | ||||||||| |||| ||||| || | || |||||||| ||||||||||| ||| | Sbjct 2712 --ACTATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAAT 2769 Query 24221 ATAA 24224 ||| Sbjct 2770 GTAA 2773 Score = 111 bits (122), Expect = 1e-19 Identities = 176/245 (72%), Gaps = 7/245 (3%) Strand=Plus/Plus Query 23984 AAACAAAAT-GCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 ||| ||||| | || | ||||| |||||| |||| |||||| | ||||| | || || | Sbjct 1527 AAAGAAAATAGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTG 1586 Query 24043 AGGCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCT 24101 | ||| | ||||| || || ||||| || ||| ||||| ||||| || || Sbjct 1587 AA-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCA 1645 Query 24102 CCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CA 24159 || ||| || | ||||| |||| | || ||| || | ||||||| |||| || | || Sbjct 1646 CCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA 1705 Query 24160 GCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGAC 24219 | | ||||||||| |||| ||||| || | || |||||||| ||||||||||| ||| Sbjct 1706 G--ACTATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 1763 Query 24220 TATAA 24224 | ||| Sbjct 1764 TGTAA 1768 >seq114 Length=165420 Score = 113 bits (124), Expect = 4e-20 Identities = 172/239 (72%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||| || | ||||||||||||||||||||||| | || || | || || || ||| Sbjct 164511 AAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CCA 164453 Query 24049 AC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||| || || ||||| || ||| ||||| ||||| || || || ||| Sbjct 164452 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 164393 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATT 24165 || | ||||| |||| | || || || | ||||||| |||| || | ||| ||| Sbjct 164392 TAATAAAGACTCATTTTTGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAG--ATT 164335 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||||| |||| ||||| || | |||||||| || ||||| ||||| ||| | ||| Sbjct 164334 ATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAATGTAA 164276 Score = 111 bits (122), Expect = 1e-19 Identities = 175/244 (72%), Gaps = 9/244 (4%) Strand=Plus/Minus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||| || | ||||||||||||||||||||||| | || || | || || || ||| Sbjct 165308 AAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-CCA 165250 Query 24049 AC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||| || || ||||| || ||| ||||| ||||| || || || ||| Sbjct 165249 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 165190 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATT 24165 || | ||||| |||| | || || || | ||||||| |||| || | ||| ||| Sbjct 165189 TAATAAAGACTCATTTTTGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAG--ATT 165132 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAAT 24225 |||||||| |||| ||||| || | || ||||| || ||||||||||| || |||| Sbjct 165131 ATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG---CTAAT 165075 Query 24226 GATT 24229 |||| Sbjct 165074 GATT 165071 Score = 109 bits (120), Expect = 5e-19 Identities = 170/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 || || |||||| | ||||| ||||||||||||||||| | || || | || || || Sbjct 139501 AAAAATATGCAAATTTTTGTTAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGA- 139559 Query 24045 GCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 ||| | |||||||| || ||||| || ||| || || ||||| || || || Sbjct 139560 ACCATCAGACACCATTGACGCTGTCAAGGCTAAAATTTAAGATAAGGAAGGAATCCCACC 139619 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGC 24161 ||| || | ||||| |||| | || ||| || | ||||||| |||| || ||| Sbjct 139620 TGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA-- 139677 Query 24162 GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||||| ||| |||| ||||| || | |||||||| || ||||| ||||| ||| Sbjct 139678 GATTATAATATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGA 139734 Score = 109 bits (120), Expect = 5e-19 Identities = 170/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||| |||||||||||||| ||| | || || | || || || ||| | Sbjct 153138 ATGTAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTAGA-ACCATC 153196 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || ||||| || ||| ||||||||||| || || || ||| | Sbjct 153197 AGACACTATAGATGCTGTCAAGGCTAAAATTTAAGACAAAGAAGGAATTCCACCTGATTA 153256 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTAT 24167 | | ||||| |||| | || ||| || | ||||||| |||| || ||| |||||| Sbjct 153257 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GATTAT 153314 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 || ||| |||| ||||| || | |||||||| || ||||| ||||| ||| | ||| Sbjct 153315 AATATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAATGTAA 153371 Score = 109 bits (120), Expect = 5e-19 Identities = 170/237 (72%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||||||||| || ||| | || || | || || || ||| | Sbjct 163788 ATGCAAATTTTTGTTAAAACATTAACCGGTAAAACCATCACTCTTGATGTTGAA-CCATC 163730 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || ||||| || ||| ||||| ||||| || || || ||| | Sbjct 163729 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 163670 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTAT 24167 | | ||||| |||| | || ||| || | ||||||| |||| || | ||| ||||| Sbjct 163669 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ATTAT 163612 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||| |||| ||||| || | |||||||| || ||||| ||||| ||| | ||| Sbjct 163611 AACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAATGTAA 163555 Score = 105 bits (116), Expect = 6e-18 Identities = 173/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 || || |||||| | ||||| ||||||||||| || ||| | || || | || || || Sbjct 140959 AAAAATATGCAAATTTTTGTTAAAACATTAACAGGTAAAACAATCACTCTTGATGTTGA- 141017 Query 24045 GCCAAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 ||| | ||||| || || ||||| || ||| ||||| ||||| || || || Sbjct 141018 ACCATCAGACACTATTGATGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATTCCACC 141077 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGC 24161 ||| || | ||||| |||| | || ||| || | ||||||| |||| || ||| Sbjct 141078 TGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA-- 141135 Query 24162 GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTA 24221 |||||||||||| |||| ||||| || | || ||||| || ||||| ||||| ||| | Sbjct 141136 GATTATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTAAGAGGTGGAATG 141195 Query 24222 TAA 24224 ||| Sbjct 141196 TAA 141198 Score = 105 bits (116), Expect = 6e-18 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||| || | ||||| |||||||||||||| ||| | || || | || || || ||| Sbjct 143883 AAATGAAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTTGA-ACCA 143941 Query 24049 AC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||| || || ||| | ||| ||| ||||| ||||| || || | ||| Sbjct 143942 TCAGACACTATTGAAGCTGTCGAGGCAAAAATTTAAGACAAGGAAGGAATCCCACTTGAT 144001 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATT 24165 || | ||||| |||| | || ||| || | ||||||| |||| || ||| |||| Sbjct 144002 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA--GATT 144059 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||||| |||| ||||| || | |||||||| || ||||| ||||| ||| Sbjct 144060 ATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGA 144112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/148 (74%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| ||||| || || || ||| || | ||||| |||| | || ||| || | ||| Sbjct 164189 GACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAA 164130 Query 24144 GATGACAGAA-ACGT-CAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGT 24201 |||| |||| || | ||| ||||||||||| |||| ||||| || | || ||||| | Sbjct 164129 GATGGAAGAACACTTTCAG--ATTATAACATTTAAAAGGAATCAACTCTCCACTTAGTCT 164072 Query 24202 TAAGATTGAGAGGAGGACTATAATGATT 24229 | ||||||||||| || |||||||| Sbjct 164071 TGAGATTGAGAGGTGG---CTAATGATT 164047 >seq454 Length=44262 Score = 111 bits (122), Expect = 1e-19 Identities = 171/238 (72%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||| || | ||||| || ||| | || |||||| | ||||| | || || || ||| Sbjct 41493 AATGTAAATCTTTGTCAAGACACTCACAGGAAAAACTATTACTCTTGATGTTGAA-CCAT 41435 Query 24050 C-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 | ||||| || || |||||| || || ||||| ||||| || || |||||| Sbjct 41434 CTGACACAATTGATGCTGTCAAAGCTAAAATCTAAGACAAGGAAGGAATCCCACCCGATT 41375 Query 24109 AACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATTA 24166 || | ||||| || | || || || || | ||||||| |||| || | ||| |||| Sbjct 41374 AATAAAGACTTATCTTCGCTGGAAAATAATTAGAAGATGGTAGAACACTTTCAG--ATTA 41317 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAA 24224 |||||| |||| ||||| ||| |||| ||||| || ||||||||||||||| | ||| Sbjct 41316 TAACATCTAAAAGGAATCAACACTTCACTTAGTTTTGAGATTGAGAGGAGGAATGTAA 41259 >seq13 Length=521119 Score = 102 bits (112), Expect = 7e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| || ||| || | ||||| || || | || || || | || || | || || || Sbjct 46253 AAATAATATGTAAATTTTTGTTAAGACCCTCACAGGCAAGACCATCACACTTGATGTTGA 46194 Query 24044 GGCCAACG-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | ||| || | |||||||| || || |||||| ||||||||||| || |||| Sbjct 46193 G-CCATCGGATACCATCGATGCTGTTAAGGCAAAGATCTAAGACAAAGAAGGAATCCCTC 46135 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | ||| || | ||| | |||| | || ||| || | || |||| |||| | | Sbjct 46134 CTGATTAATAAAGATTAATTTTTGCTGGAAAGTAATTAGAGGATGGAAGAACTCTTTCTG 46075 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||| |||||||||| ||| |||||||||| || ||| | |||||||| Sbjct 46074 ATTATAACATTTAAAAAGAATCAACACTTCATTTAGTATTGAGACTCAGAGGAGG 46020 >seq128 Length=150569 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||| || ||| || | ||||| ||||| | || ||||| | || || | || || || Sbjct 57829 AAATAATATGTAAATTTTTGTTAAAACCCTGACGGGAAAGACCATCACTCTTGATGTAGA 57888 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | | || || || || || || |||||| || |||||||| || || || Sbjct 57889 GCCTTCAGATACAATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCACC 57948 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 ||| || | ||| |||||| | || |||||||||||||||| |||| | || Sbjct 57949 TGATTAATAAAGATTGATTTTTGCAGGAAAGCAACTCGAAGATGGAAGAACTCTTTCAGA 58008 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||| ||| |||||||||| || | |||||||| |||||| | ||||| || Sbjct 58009 TTATAATATTTAAAAAGAATCAACTCTCCATTTAGTATTAAGACTAAGAGGTGG 58062 >seq507 Length=36014 Score = 96.9 bits (106), Expect = 3e-15 Identities = 172/244 (70%), Gaps = 9/244 (4%) Strand=Plus/Plus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 ||||| || | || || || || || ||||||||| | || || | || || || ||| Sbjct 35486 AAATGTAAATTTTCGTTAAGACCTTGACTGGAAAAACCATCACTCTTGATGTTGAA-CCA 35544 Query 24049 AC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | ||||| || || ||||| || ||| ||||| ||||| || || || ||| Sbjct 35545 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 35604 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGT-CAGCGATT 24165 || | ||||| |||| | || ||| || | ||||||| |||| || | ||| ||| Sbjct 35605 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG--ATT 35662 Query 24166 ATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAAT 24225 |||||||| |||| ||||| || | || ||||| || ||||||||||| || |||| Sbjct 35663 ATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG---CTAAT 35719 Query 24226 GATT 24229 |||| Sbjct 35720 GATT 35723 >seq260 Length=80851 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||| || | ||||| ||||| | || ||||| | || || | || || || | | Sbjct 28014 ATGTAAATTTTTGTTAAAACCCTTACAGGAAAGACAATCACTTTAGATGTTGATCCAGAT 28073 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||| || |||| ||| | | || | || ||||| || || || ||| || Sbjct 28074 CACACCATTGATGAAGTTAAAAACTAAATCTAGAATAAGGAAGGAATTCCACCTGATTAA 28133 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 | ||||| |||| | || ||| || | ||||||| ||||| | |||||||| Sbjct 28134 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAAAGCTTTCAGATTATAAT 28193 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGACTATAATGATT 24229 || |||| ||||| ||| | || ||||| ||||||||||||||||| |||||||| Sbjct 28194 ATCTAAAAGGAATCAACATTACACTTAGTTTTAAGATTGAGAGGAGG---TTAATGATT 28249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429923707323630