Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq114 109 5e-19 seq337 107 2e-18 seq287 107 2e-18 seq507 96.9 3e-15 seq454 95.1 1e-14 seq56 91.5 1e-13 seq260 82.4 6e-11 >seq114 Length=165420 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 ||||| |||||||||| ||||| | || || |||||||| || | || || ||| Sbjct 143883 AAATGAAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTTGAA-CCA 143941 Query 115344 GC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 | |||||| ||| | || | ||||||| || || ||||| |||| ||||| Sbjct 143942 TCAGACACTATTGAAGCTGTCGAGGCAAAAATTTAAGACAAGGAAGGAATCCCACTTGAT 144001 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 | ||||||| |||| ||| || || |||||||||||| | ||| | | |||||| Sbjct 144002 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTAT 144061 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||| |||| || || ||| | ||| | || |||||||| |||| |||| Sbjct 144062 AACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAA 144113 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| | || || |||||||| || | || || ||| | Sbjct 163788 ATGCAAATTTTTGTTAAAACATTAACCGGTAAAACCATCACTCTTGATGTTGAA-CCATC 163730 Query 115346 -GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| || || |||||| || || ||||| |||| |||| | Sbjct 163729 AGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTA 163670 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| |||| ||| || || |||||||||||| | ||| | | |||||||| Sbjct 163669 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAA 163610 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| |||| || || ||| | ||| | || |||||||| |||| |||| Sbjct 163609 CATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAA 163560 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 || ||||| |||| ||||| ||||| | || ||||| || || || | || || Sbjct 164514 TAGAAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA- 164456 Query 115341 CCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 ||| | |||||| ||| || || |||||| || || ||||| |||| | Sbjct 164455 CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCT 164396 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||| | ||||||| |||| ||| || ||| |||||||||||| | ||| | | ||| Sbjct 164395 GATTAATAAAGACTCATTTTTGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAGAT 164336 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||| |||| || || ||| | ||| | || |||||||| |||| |||| Sbjct 164335 TATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAA 164281 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| |||||||||||||| ||||| | || ||||| || || || | || || | Sbjct 139503 AAATATGCAAATTTTTGTTAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA-C 139561 Query 115342 CAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 || | ||||| ||| || || |||||| ||||| ||||| |||| || Sbjct 139562 CATCAGACACCATTGACGCTGTCAAGGCTAAAATTTAAGATAAGGAAGGAATCCCACCTG 139621 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 || | ||||||| |||| ||| || || |||||||||||| | ||| | | |||| Sbjct 139622 ATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATT 139681 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| ||| |||| || || ||| | ||| | || |||||||| |||| |||| Sbjct 139682 ATAATATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAA 139735 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 115281 TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGT 115340 || ||||| |||| ||||| ||||| | || ||||| || || || | || || Sbjct 165311 TAGAAATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAA- 165253 Query 115341 CCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 ||| | |||||| ||| || || |||||| || || ||||| |||| | Sbjct 165252 CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCT 165193 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 ||| | ||||||| |||| ||| || ||| |||||||||||| | ||| | | ||| Sbjct 165192 GATTAATAAAGACTCATTTTTGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAGAT 165133 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||| |||| || || ||| | || | || ||||||||| |||| || Sbjct 165132 TATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 165080 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||| |||||||||||||| ||||| | || || ||||| || || | || || | Sbjct 140961 AAATATGCAAATTTTTGTTAAAACATTAACAGGTAAAACAATCACTCTTGATGTTGAA-C 141019 Query 115342 CAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 || | |||||| ||| || || |||||| || || ||||| | || || Sbjct 141020 CATCAGACACTATTGATGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATTCCACCTG 141079 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 || | ||||||| |||| ||| || || |||||||||||| | ||| | | |||| Sbjct 141080 ATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATT 141139 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||| |||| || || ||| | || | || |||||||| |||| |||| Sbjct 141140 ATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTAAGAGGTGGAA 141193 Score = 91.5 bits (100), Expect = 1e-13 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 115280 TTAAAA--ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGG 115337 |||||| ||| |||||||||| ||||| | || || |||||||| || | || | Sbjct 153130 TTAAAACTATGTAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTAG 153189 Query 115338 AGTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 | ||| | |||||| | | || || |||||| || |||||||| | || Sbjct 153190 AA-CCATCAGACACTATAGATGCTGTCAAGGCTAAAATTTAAGACAAAGAAGGAATTCCA 153248 Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456 |||| | ||||||| |||| ||| || || |||||||||||| | ||| | | Sbjct 153249 CCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCA 153308 Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||| ||| |||| || || ||| | ||| | || |||||||| |||| |||| Sbjct 153309 GATTATAATATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAA 153366 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 115370 AAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAA 115429 |||||| || || ||||| |||| |||| | ||||||| |||| ||| || || Sbjct 164198 AAAATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAG 164139 Query 115430 CAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACAT 115489 |||||||||||| | ||| | | |||||||||||| |||| || || ||| | || Sbjct 164138 TAATTAGAAGATGGAAGAACACTTTCAGATTATAACATTTAAAAGGAATCAACTCTCCAC 164079 Query 115490 ATGGTGTTGAGATTGCGAGGAGG 115512 | || ||||||||| |||| || Sbjct 164078 TTAGTCTTGAGATTGAGAGGTGG 164056 >seq337 Length=64228 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 61310 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 61368 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| |||| ||| Sbjct 61369 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 61428 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || |||||||||||| | ||| | | || || Sbjct 61429 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTA 61488 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| |||| || || ||| | || | |||||||||||| |||| |||| Sbjct 61489 TAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 61541 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 63082 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 63140 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| |||| ||| Sbjct 63141 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 63200 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || |||||||||||| | ||| | | || || Sbjct 63201 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTA 63260 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| |||| || || ||| | || | |||||||||||| |||| |||| Sbjct 63261 TAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 63313 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 62311 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 62369 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| |||| ||| Sbjct 62370 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 62429 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || |||||||||||| | ||| | | || || Sbjct 62430 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTA 62489 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||| |||| || || ||| | || | ||||||||||| |||| || Sbjct 62490 TAACATTTAAAAGGAATCAACTCTTCACTTAGTGTTGAGATTAAGAGGTGG 62540 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| ||||||| || || || | || ||||||||||| || | || || ||| Sbjct 63312 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAA-CCAT 63370 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||||| ||| || || |||||| || || ||||| |||| |||| Sbjct 63371 CAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 63430 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 63431 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 63490 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||| || || ||| | || | ||||||||||| |||| || Sbjct 63491 ACATTTAAAAGGAATCAACTCTTCACTTAGTGTTGAGATTAAGAGGTGG 63539 >seq287 Length=75303 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 526 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 584 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| |||| ||| Sbjct 585 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 644 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || |||||||||||| | ||| | | || || Sbjct 645 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTA 704 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| |||| || || ||| | || | |||||||||||| |||| |||| Sbjct 705 TAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 757 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 2537 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 2595 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| |||| ||| Sbjct 2596 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGA 2655 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | ||||||| |||| ||| || || |||||||||||| | ||| | | || || Sbjct 2656 TTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTA 2715 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| |||| || || ||| | || | |||||||||||| |||| |||| Sbjct 2716 TAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 2768 Score = 100 bits (110), Expect = 2e-16 Identities = 165/234 (71%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 115283 AAAAT-GCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 ||||| | |||| ||||| ||||| || || |||||||| ||||| | || || | Sbjct 1531 AAAATAGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-C 1589 Query 115342 CAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 || | |||||| ||| || || |||||| || || ||||| |||| || Sbjct 1590 CATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTG 1649 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 || | ||||||| |||| ||| || || |||||||||||| | ||| | | || | Sbjct 1650 ATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACT 1709 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||| |||| || || ||| | || | |||||||||||| |||| |||| Sbjct 1710 ATAACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGGAA 1763 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||| |||| ||||| ||||| || || |||||||| ||||| | || || || Sbjct 3537 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAA-CC 3595 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | |||||| ||| || || |||||| || || ||||| | || || | Sbjct 3596 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGAAAAGGAAGGAATTCCAATTTA 3655 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 | | |||||||||||| ||| || || ||||| |||||| |||| | | || || Sbjct 3656 TTAATAAAGACTTATTTTTGCAGGAAAGTAATTAAAAGATGGAAAAATACTTTCAGACTA 3715 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||| |||| || || ||| | || | |||||||||| |||| || Sbjct 3716 TAACATTTAAAAGGAATCAACTCTCCACGCAGGGTTGAGATTGAGAGGTGG 3766 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| ||||||| || || || | || ||||||||||| || | || || ||| Sbjct 756 AATGTAAATTTTCGTTAAGACTTTGACTGGAAAAACCATCACTCTTGATGTTGAA-CCAT 814 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||||| ||| || || |||||| || || ||||| |||| |||| Sbjct 815 CAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATT 874 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | ||||||| |||| ||| || || |||||||||||| | ||| | | || |||| Sbjct 875 AATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATA 934 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||| || || ||| | || | ||||||||||| |||| || Sbjct 935 ACATTTAAAAGGAATCAACTCTTCACTTAGTGTTGAGATTAAGAGGTGG 983 >seq507 Length=36014 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG 115336 ||| || ||||| ||||||| || || || | || ||||||||||| || | || Sbjct 35479 AGAATAGAAATGTAAATTTTCGTTAAGACCTTGACTGGAAAAACCATCACTCTTGATGTT 35538 Query 115337 GAGTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCC 115395 || ||| | |||||| ||| || || |||||| || || ||||| |||| Sbjct 35539 GAA-CCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCC 35597 Query 115396 CGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGC 115455 |||| | ||||||| |||| ||| || || |||||||||||| | ||| | | Sbjct 35598 ACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTC 35657 Query 115456 CGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||||| |||| || || ||| | || | || ||||||||| |||| || Sbjct 35658 AGATTATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATTGAGAGGTGG 35714 >seq454 Length=44262 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||| |||| |||||||| || ||||| |||||||| ||||| | || || ||| Sbjct 41493 AATGTAAATCTTTGTCAAGACACTCACAGGAAAAACTATTACTCTTGATGTTGAA-CCAT 41435 Query 115345 C-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | ||||| ||| || ||| ||||| || || ||||| |||| ||| Sbjct 41434 CTGACACAATTGATGCTGTCAAAGCTAAAATCTAAGACAAGGAAGGAATCCCACCCGATT 41375 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 | |||||||||| | || || ||| |||||||||||| | ||| | | ||||||| Sbjct 41374 AATAAAGACTTATCTTCGCTGGAAAATAATTAGAAGATGGTAGAACACTTTCAGATTATA 41315 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||| |||| || || || | || | || ||||||||| ||||||||| Sbjct 41314 ACATCTAAAAGGAATCAACACTTCACTTAGTTTTGAGATTGAGAGGAGGAA 41264 Score = 89.7 bits (98), Expect = 4e-13 Identities = 171/248 (69%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 115268 ATTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| |||| | || || |||| ||||||| || || || ||||| ||||| || ||||| Sbjct 41737 ATTAATAATA-ATAAACAATGTAAATTTTCGTAAAGACACTCACAGGAAAGACAATTACT 41679 Query 115328 GTCGAAACGGAGTCCAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGA 115386 | || || ||| | ||||| ||| || ||| ||||| || || || Sbjct 41678 CTTGATGTTGAA-CCATCTGACACAATTGATGCTGTCAAAGCTAAAATCTAAGACAAGGA 41620 Query 115387 AGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAA 115446 ||| |||| ||| | ||||||||||| | ||| || ||| |||||||||| | | Sbjct 41619 AGGAATCCCACCCGATTAACAAAGACTTATCTTTGCAGGAAAATAATTAGAAGACGGAAG 41560 Query 115447 AACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCG 115506 ||| | | || ||||||||| |||| || || || | || | || |||||||| | Sbjct 41559 AACACTTTCAGACTATAACATTTAAAAGGAATCAACACTTCACTTAGTTTTGAGATTAAG 41500 Query 115507 AGGAGGAA 115514 |||||||| Sbjct 41499 AGGAGGAA 41492 >seq56 Length=265680 Score = 91.5 bits (100), Expect = 1e-13 Identities = 169/248 (68%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 115269 TTTATAAGAGATTAAAA----ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATT 115324 ||||| | | |||||| ||| |||||||||| ||||| | |||||||| || || Sbjct 113249 TTTATTAAAATTTAAAATATTATGTAAATTTTTGTTAAAACCTTGACGGGAAAGACTATC 113308 Query 115325 ACCGTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAA 115384 || | || || | ||||| ||| || || || ||| |||||| Sbjct 113309 ACACTTGATGTAGAACCTTCAGACACCATTGATGCTGTTAAGGCTAAGATTTAAGATAAA 113368 Query 115385 GAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGAC 115444 ||||| | || |||||| ||||| | |||| ||| || || ||| | ||||||| Sbjct 113369 GAAGGAATTCCTCCTGATCAATAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGATGGA 113428 Query 115445 AAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTG 115504 | ||| | | |||||||||||| ||||||| || ||| | ||| | || |||||||| Sbjct 113429 AGAACTCTTTCAGATTATAACATTTAAAAAGAATCAACTCTTCATTTAGTATTGAGATTA 113488 Query 115505 CGAGGAGG 115512 ||||||| Sbjct 113489 AGAGGAGG 113496 >seq260 Length=80851 Score = 82.4 bits (90), Expect = 6e-11 Identities = 173/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||| |||||||||| ||||| || || ||||| || || || | || || ||||| Sbjct 28014 ATGTAAATTTTTGTTAAAACCCTTACAGGAAAGACAATCACTTTAGATGTTGA-TCCAGA 28072 Query 115346 G-ACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||| ||| |||| ||| | |||| |||| ||||| | || |||| | Sbjct 28073 TCACACCATTGATGAAGTTAAAAACTAAATCTAGAATAAGGAAGGAATTCCACCTGATTA 28132 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||||||| |||| ||| || || |||||||||||| | || | | |||||||| Sbjct 28133 ATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAAAGCTTTCAGATTATAA 28192 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCACAATA 115524 || |||| || || || |||| | || || |||||| ||||||| || | || Sbjct 28193 TATCTAAAAGGAATCAACATTACACTTAGTTTTAAGATTGAGAGGAGGTTAATGA-TTTA 28251 Query 115525 AAAAATTAATATTA 115538 ||| ||| |||||| Sbjct 28252 AAATATTCATATTA 28265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425331838617520