Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq711 113 5e-20 >seq711 Length=17244 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140652 GCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTGTAAATCC 140711 |||||||| || || | |||||| || || ||| |||||||||||||| | |||| | Sbjct 10085 GCAATGTTAAAAGGGACGCCCAAAAATACATCAGCACTTCTTTGATACAATTGTAGTGAC 10026 Query 140712 AAATAGCCATTACGCACATTAAATTGATAGAACATATGACAAGGCGGTAATGCCATATAT 140771 || | |||| |||| ||| ||| | || ||||||||||| ||| ||||||| | Sbjct 10025 AATTTTCCATCTGCTACATAAAACTGAAACAATGCATGACAAGGCGCTAAAGCCATATTT 9966 Query 140772 TTAAGTTCAGCTGGATTCCACGCAGAAACAATTTGTCGCCTATCATTCGGCAGTTTTTTA 140831 || ||| |||| |||||| |||||||| || ||| ||| || || ||| || Sbjct 9965 GGAATTTCGGCTGCATTCCAAGCAGAAACGATAAGTCTTCTAGAATCAGGATTTTTCTTG 9906 Query 140832 ATACGATCAATAACTTCTACAATTTGGTCTAC 140863 || | || | || ||||| ||||||||||| Sbjct 9905 ATTTGCTCTACTACCTCTACGATTTGGTCTAC 9874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530704436636000