Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq114 84.2 2e-11 >seq114 Length=165420 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 111180 TTTAAAA-ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGG 111238 |||||| |||||||||||||| ||||| | ||||| |||||||| || | || | Sbjct 163796 TTTAAACTATGCAAATTTTTGTTAAAACATTAACCGGTAAAACCATCACTCTTGATGTTG 163737 Query 111239 AACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111298 |||| || || ||| | || || |||||| ||||| ||||| | || Sbjct 163736 AACCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 163677 Query 111299 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111358 ||| || |||| || |||| ||| || || |||| |||||| | ||| | | | Sbjct 163676 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 163617 Query 111359 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||||||| || |||| ||||| || || |||||||| ||| Sbjct 163616 ATTATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTG 163576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423027904493200