Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq114 156 4e-33 seq337 118 9e-22 seq287 118 9e-22 seq56 109 5e-19 seq112 102 7e-17 seq13 102 7e-17 seq128 91.5 1e-13 seq260 89.7 4e-13 >seq114 Length=165420 Score = 156 bits (172), Expect = 4e-33 Identities = 182/243 (75%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 22196 TATAGTT-TTATACATTTGTAAAG-ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAAC 22253 |||| || |||| || | |||| |||||||||||||||||||| |||||||||||||| Sbjct 163813 TATAATTATTATCTATATTTAAACTATGCAAATTTTTGTTAAAACATTAACCGGTAAAAC 163754 Query 22254 GGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGA 22313 |||||||||| || ||| | | || || | |||| | |||| |||||| |||| Sbjct 163753 CATCACTCTTGATGTTGAACCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGA 163694 Query 22314 CAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGA 22373 |||||| || || ||||| ||| || || | || || ||||| || || | ||||| || Sbjct 163693 CAAGGAAGGAATCCCACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGA 163634 Query 22374 TCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 | | || | || ||||| |||||| |||| ||||| || | |||||||||||| | Sbjct 163633 TGGAAGAACACTTTCAGATTATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAG 163574 Query 22434 ATT 22436 ||| Sbjct 163573 ATT 163571 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268 |||| ||| |||||||||||||||||||| ||||| |||||||| |||||||||| || Sbjct 140955 ATTTAAAAATATGCAAATTTTTGTTAAAACATTAACAGGTAAAACAATCACTCTTGATGT 141014 Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 ||| | | || || | || | | |||| |||||| |||||||||| || ||||| Sbjct 141015 TGAACCATCAGACACTATTGATGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATTCC 141074 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 ||| ||| || || | || || ||||| || || | ||||| ||| | || | || Sbjct 141075 ACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTC 141134 Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||| |||||| |||| ||||| || | || ||||| ||| |||| Sbjct 141135 AGATTATAACATTTAAAAGGAATCAACTCTCCACTTAGTCTTGAGATT 141182 Score = 143 bits (158), Expect = 2e-29 Identities = 183/251 (73%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268 |||| ||| |||||||||||||||||||| ||||| || || || |||||||||| || Sbjct 139497 ATTTAAAAATATGCAAATTTTTGTTAAAACATTAACTGGAAAGACTATCACTCTTGATGT 139556 Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 ||| | | || ||| | |||| | |||| |||||| |||| ||||| || || || Sbjct 139557 TGAACCATCAGACACCATTGACGCTGTCAAGGCTAAAATTTAAGATAAGGAAGGAATCCC 139616 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 ||| ||| || || | || || ||||| || || | ||||| ||| | || | || Sbjct 139617 ACCTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTC 139676 Query 22389 CGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG-TT 22447 ||||| || ||| |||| ||||| || | |||||||||||| |||| | || || | Sbjct 139677 AGATTATAATATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATTAAGAGGTGGAAT 139736 Query 22448 TTCCATTTTAA 22458 ||| ||| ||| Sbjct 139737 TTCAATTATAA 139747 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||||||||||||||| ||||| |||||||| |||||||||| || ||| | | Sbjct 143885 ATGAAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTTGAACCATCA 143944 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || | ||||||| |||||||||| || || |||| ||| || Sbjct 143945 GACACTATTGAAGCTGTCGAGGCAAAAATTTAAGACAAGGAAGGAATCCCACTTGATTAA 144004 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || | ||||| ||| | || | || ||||| ||| Sbjct 144005 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAAC 144064 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||| |||| ||||| || | |||||||||||| |||| Sbjct 144065 ATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATT 144102 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||||||||||||||| ||||| |||||||| |||||||||| || ||| | | Sbjct 153138 ATGTAAATTTTTGTTAAAACATTAACTGGTAAAACCATCACTCTTGATGTAGAACCATCA 153197 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | |||| |||||| ||||||| || || |||||||| ||| || Sbjct 153198 GACACTATAGATGCTGTCAAGGCTAAAATTTAAGACAAAGAAGGAATTCCACCTGATTAA 153257 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || || | ||||| ||| | || | || ||||| || Sbjct 153258 TAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGATTATAAT 153317 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||| |||| ||||| || | |||||||||||| |||| Sbjct 153318 ATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATT 153355 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||| ||||| ||||| ||||| || || || |||||||||| || ||| | | Sbjct 164509 ATGTAAATATTTGTAAAAACATTAACTGGAAAGACTATCACTCTTGATGTTGAACCATCA 164450 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | |||| | |||| |||||| |||||||||| || || ||||| ||| || Sbjct 164449 GACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAA 164390 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| || ||| | ||||| ||| | || | || ||||| ||| Sbjct 164389 TAAAGACTCATTTTTGCAGGAAAATAATTAGAAGATGGAAGAACACTTTCAGATTATAAC 164330 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||| |||| ||||| || | |||||||||||| |||| Sbjct 164329 ATTTAAAAGGAATCAACTCTCCATTTAGTTTTGAGATT 164292 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| ||||| || || || |||||||| |||||||||| || ||| | Sbjct 149502 AAATATGCAAATTTTCGTTAAGACCTTGACTGGTAAAACCATCACTCTTGATGTTGAACC 149561 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | || || | |||| | |||| |||||| |||||||||| || || ||| | || Sbjct 149562 ATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCA-CTGA 149620 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAA 22362 | || || | || || |||| | | ||| Sbjct 149621 TTAATAAAGACTCAT-TTTGTCAGGAAA 149647 >seq337 Length=64228 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 61310 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 61369 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 61370 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 61429 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | || | || || || Sbjct 61430 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTAT 61489 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| |||| ||||| || | || ||||| ||| ||||| | || || Sbjct 61490 AACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGG 61539 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 63082 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 63141 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 63142 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 63201 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | || | || || || Sbjct 63202 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTAT 63261 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| |||| ||||| || | || ||||| ||| ||||| | || || Sbjct 63262 AACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGG 63311 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 62311 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 62370 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 62371 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 62430 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | || | || || || Sbjct 62431 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTAT 62490 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||| |||| ||||| || | || ||||| ||| |||| Sbjct 62491 AACATTTAAAAGGAATCAACTCTTCACTTAGTGTTGAGATT 62531 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 64082 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 64141 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 64142 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 64201 Query 22336 CAACAACGTCTTATATTTGCCGGCAA 22361 || || | || || ||||| || || Sbjct 64202 TAATAAAGACTCATTTTTGCAGGAAA 64227 >seq287 Length=75303 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 526 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 585 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 586 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 645 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | || | || || || Sbjct 646 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTAT 705 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| |||| ||||| || | || ||||| ||| ||||| | || || Sbjct 706 AACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGG 755 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 2537 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 2596 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||||||||| || || ||||| ||| Sbjct 2597 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGAT 2656 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | || | || || || Sbjct 2657 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTAT 2716 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| |||| ||||| || | || ||||| ||| ||||| | || || Sbjct 2717 AACATTTAAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGG 2766 Score = 114 bits (126), Expect = 1e-20 Identities = 159/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 22223 AAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATA 22282 |||| ||||||||||| |||| || ||||| | |||||||| || ||| | | || | Sbjct 1539 AAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCATCAGACA 1598 Query 22283 CCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAAC 22342 | | |||| | |||| |||||| |||||||||| || || ||||| ||| || || Sbjct 1599 CTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCACCTGATTAATAAA 1658 Query 22343 GTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTC 22402 | || || ||||| || || | ||||| ||| | || | || || || |||||| Sbjct 1659 GACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAGACTATAACATTT 1718 Query 22403 AAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||| ||||| || | || ||||| ||| ||||| | || || Sbjct 1719 AAAAGGAATCAACTCTCCACTTAGTGTTGAGATTGAGAGGTGG 1761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||| ||||||||||| |||| || ||||| | |||||||| || ||| | Sbjct 3537 AAAATGTAAATATTTGTTAAAACACTAACAGGAAAAACTATTACTCTTGATGTTGAACCA 3596 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | |||| | |||| |||||| |||| ||||| || |||||| || Sbjct 3597 TCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGAAAAGGAAGGAATTCCAATTTAT 3656 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | ||||| ||||| || || | ||| | ||| | | || || || Sbjct 3657 TAATAAAGACTTATTTTTGCAGGAAAGTAATTAAAAGATGGAAAAATACTTTCAGACTAT 3716 Query 22396 AACATTCAAAAAGAATCCAC 22415 |||||| |||| ||||| || Sbjct 3717 AACATTTAAAAGGAATCAAC 3736 >seq56 Length=265680 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||||||||||||||| || || || || || |||| ||||| || ||| | | Sbjct 113270 ATGTAAATTTTTGTTAAAACCTTGACGGGAAAGACTATCACACTTGATGTAGAACCTTCA 113329 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | | || || ||| |||| || || || ||||| || |||||| Sbjct 113330 GACACCATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCTCCTGATCAA 113389 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || | || ||| | || | || ||||| ||| Sbjct 113390 TAAAGATTGATTTTTGCAGGAAAGCAACTTGAAGATGGAAGAACTCTTTCAGATTATAAC 113449 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| |||||||||| || | |||||||| ||| |||| | |||||| Sbjct 113450 ATTTAAAAAGAATCAACTCTTCATTTAGTATTGAGATTAAGAGGAGGT 113497 >seq112 Length=167324 Score = 102 bits (112), Expect = 7e-17 Identities = 203/296 (69%), Gaps = 11/296 (4%) Strand=Plus/Plus Query 22153 ATGCTTTTTGTATTTCAATACTTAATAAATTTAATATAAGAGATATAGTTTTATACATTT 22212 ||||||||||| || |||| ||| |||||| || | ||| | |||| | |||| Sbjct 45213 ATGCTTTTTGT-TTAGAATA--TAAATAATTTATTAAA---GATTT---TTTAAAAATTT 45263 Query 22213 GTAA--AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGG 22270 || | ||| ||||||||||||| || | || ||||| || |||| ||||| || | Sbjct 45264 AAAATAATATGTAAATTTTTGTTAAGACCCTTACGGGTAAGACCATCACACTTGATGTTG 45323 Query 22271 AAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCAC 22330 | | | ||||| | || | | | || ||| || | |||||||| || || || | Sbjct 45324 AGCCATCTGATACTATCGATGCTGTTAAGGCAAAGATCTAGGACAAGGAAGGAATCCCTC 45383 Query 22331 CCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCG 22390 ||||| || || | | || ||||| || || || || |||||| | || | || | Sbjct 45384 CCGATTAATAAAGATTAATTTTTGCTGGAAAGCAATTGGAGGATGGAAGAACTCTTTCAG 45443 Query 22391 ATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || |||||||||| || | |||||||| ||| || | | |||||| Sbjct 45444 ATTATAATATCTAAAAAGAATCAACTCTCCATTTAGTATTGAGACTCAGAGGAGGT 45499 >seq13 Length=521119 Score = 102 bits (112), Expect = 7e-17 Identities = 172/248 (69%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 22201 TTTTATACATTTGTAA--AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCA 22258 ||||| | |||| || | ||| ||||||||||||| || | || || || || ||| Sbjct 46266 TTTTAAAAATTTAAAATAATATGTAAATTTTTGTTAAGACCCTCACAGGCAAGACCATCA 46207 Query 22259 CTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGG 22318 | ||||| || || | | |||||| | || | | | || ||| || ||||||| | Sbjct 46206 CACTTGATGTTGAGCCATCGGATACCATCGATGCTGTTAAGGCAAAGATCTAAGACAAAG 46147 Query 22319 AGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACC 22378 | || || || || ||| || || | | || ||||| || || | ||||||||| Sbjct 46146 AAGGAATCCCTCCTGATTAATAAAGATTAATTTTTGCTGGAAAGTAATTAGAGGATGGAA 46087 Query 22379 GCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGC 22438 | || | || ||||| |||||| |||||||||| || | |||||||| ||| || | Sbjct 46086 GAACTCTTTCTGATTATAACATTTAAAAAGAATCAACACTTCATTTAGTATTGAGACTCA 46027 Query 22439 GCGGAGGT 22446 | |||||| Sbjct 46026 GAGGAGGT 46019 >seq128 Length=150569 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||| |||||||||||||||| | || || || || |||||||||| || || | Sbjct 57833 AATATGTAAATTTTTGTTAAAACCCTGACGGGAAAGACCATCACTCTTGATGTAGAGCCT 57892 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || | | | || || ||| |||| || || || |||||||| ||| Sbjct 57893 TCAGATACAATTGATGCTGTTAAGGCTAAGATTTAAGATAAAGAAGGAATTCCACCTGAT 57952 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || ||||| || || || | || ||| | || | || ||||| Sbjct 57953 TAATAAAGATTGATTTTTGCAGGAAAGCAACTCGAAGATGGAAGAACTCTTTCAGATTAT 58012 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 || ||| |||||||||| || | |||||||| || Sbjct 58013 AATATTTAAAAAGAATCAACTCTCCATTTAGTATT 58047 >seq260 Length=80851 Score = 89.7 bits (98), Expect = 4e-13 Identities = 178/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||| |||||||||||||||| | || || || || ||||| | || || | | ||| Sbjct 28014 ATGTAAATTTTTGTTAAAACCCTTACAGGAAAGACAATCACTTTAGATGTTG-ATCCA-- 28070 Query 22279 GAT---ACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||| ||| | || || | ||| | |||| | | ||||| || |||||||| ||| Sbjct 28071 GATCACACCATTGATGAAGTTAAAAACTAAATCTAGAATAAGGAAGGAATTCCACCTGAT 28130 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | || || ||||| || || | ||||| ||| | | | || ||||| Sbjct 28131 TAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAAAGCTTTCAGATTAT 28190 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTTCCATTT 22455 || || |||| ||||| || |||| |||||||| ||||| | ||||||| |||| Sbjct 28191 AATATCTAAAAGGAATCAACATTACACTTAGTTTTAAGATTGAGAGGAGGTTAATGATTT 28250 Query 22456 TAAA-ATT-ATATTATAT 22471 ||| ||| |||||| || Sbjct 28251 AAAATATTCATATTACAT 28268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419715999189490