Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1023 199 2e-46 >seq1023 Length=4203 Score = 199 bits (220), Expect = 2e-46 Identities = 515/775 (66%), Gaps = 15/775 (2%) Strand=Plus/Minus Query 65904 GTGGACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTAT 65963 ||||| | ||| ||||||| ||| | | || || ||||| || || || || | Sbjct 3623 GTGGAAGCGATTTCCACCGGATCGCTGGGCCTTGATATTGCTCTGGGGATTGGCGGTTTG 3564 Query 65964 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 66023 ||| | || || | || || || || || || || || || || | ||| || Sbjct 3563 CCGCGCGGGCGTATCGTCGAAATTTATGGCCCGGAAAGCTCGGGCAAAACCACGCTGGCA 3504 Query 66024 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAA 66083 | |||||| | ||| | || || |||| ||| |||| || |||| | || || ||| Sbjct 3503 TTGCACGCGATTGCCGAGGCGCAAAAGGGCGGCGGCACGGCGGCCTTTGTGGATGCAGAA 3444 Query 66084 CATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTT 66143 ||| | ||||| || | || ||| | || || || ||| |||||||||| | || Sbjct 3443 CATGCGCTCGATCCGGTCTATGCCAAGAAACTGGGCGTCGATATCGACAATCTGATCGTC 3384 Query 66144 GTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGC 66203 |||||| || || ||||||||||| || || ||||| || || || || Sbjct 3383 TCGCAGCCTGATACGGGCGAGCAGGCGCTCGAAATCGTCGATACGCTGGTGCGTTCCAAT 3324 Query 66204 GAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAA 66263 | | || | | | || || ||||| |||||||| ||||||||||| || || |||| Sbjct 3323 GCGATTGACGTGCTGGTGGTCGACTCAGTGGCGGCGCTGGTGCCGCGTGCCGAAATCGAG 3264 Query 66264 GGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGC 66323 || || || || ||| || |||||||| || |||||| ||||| ||||| ||||| Sbjct 3263 GGTGAGATGGGCGACAGCCATGTCGGCCTTCAGGCCCGCTTGATGAGCCAGGCGCTGCGC 3204 Query 66324 AAGCTGACCGGCACGATTGCCAGCACCAACACGCT-CACCCTG---TGGGTGAATCAGCT 66379 |||||||||||| |||| |||| | | |||| || || | | |||||| | Sbjct 3203 AAGCTGACCGGCTCGAT---CAGC-CGTTCGCGCTGCATGGTGATCTTCATCAATCAGGT 3148 Query 66380 GCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGC 66439 |||| ||||||||| |||| |||||| ||| || || || || || || || Sbjct 3147 GCGCATGAAGATCGG---CGTGATGTACGGCAATCCTGAAACGACGACGGGCGGCAATGC 3091 Query 66440 TCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGA-GAAGGAAG 66498 || ||||| || ||||||||| | || | ||| | | || | || ||||| Sbjct 3090 GCTCAAGTTCTATGCTTCGGTGCGTCTCGACATTCGCCGCA-CGGGCCAGATCAAGGATC 3032 Query 66499 GCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTC 66558 |||| || || ||||| || ||||||||||| || ||||||||| ||||||| | Sbjct 3031 GCGACGATATCGTGGGCAATGCGACTCGCGTGAAGGTGGTAAAGAACAAGGTGGCGCCGC 2972 Query 66559 CGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC-CGCGAGGCTGAA 66617 | | |||| || || |||| | || ||||| ||||||||| | ||| || Sbjct 2971 CTTTCAAGCAGGTCGAATTCGACATCATGTATGGCGAAGGCATTTCCAAGATCGGC-GAG 2913 Query 66618 CTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCA 66672 ||||||| ||| ||| ||| | || ||||||| || || ||||||| Sbjct 2912 ATCCTCGATCTGGGCGTGAAGGCCGGGATTGTCGAGAAGTCGGGTGCGTGGTTCA 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242463467316632