Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq54 82.4 5e-11 >seq54 Length=273537 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 || || || ||||| || | ||||| || ||||| || ||||| ||||||| | | Sbjct 34818 ATATTCCCCAAATCTCCTACATGTCTTTTCTCATCTAAAGGACCGCCATGTTCTTGTTCA 34759 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 |||||||| ||||| || || | | |||||||||| | ||| ||||||||||| Sbjct 34758 AAAGGATTGAAATGAGGTCCTGCTGTTACACATCCATTGCTTAAATCCCCAAATTCATGA 34699 Query 42632 ATATGAAAACCGTGA 42646 ||||||| |||||| Sbjct 34698 ATATGAATGCCGTGA 34684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347359668051818