Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25]
2,346 sequences; 76,963,137 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq253 84.2 3e-11
seq25 82.4 9e-11
>seq253
Length=82967
Score = 84.2 bits (92), Expect = 3e-11
Identities = 117/162 (72%), Gaps = 8/162 (5%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAA----AG 119551
|| || ||| |||||| |||||||| | || || | ||||| |||| || ||
Sbjct 29623 GCGAAGTCTGTATGAAGACCTTCATCTCTTGAAATTAATTCATT--TGAA--AATGTGAG 29568
Query 119552 TCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAA 119611
||||||||| | | |||||| |||| ||| || ||||||||||| |||||||||||
Sbjct 29567 TCCAGGCATCAATGATCTTTTTTTTATCCAGAAAATGGCACAAAATGAACCAGAAAAGAA 29508
Query 119612 GATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653
|| || || ||| | || ||||| | || | ||||||||
Sbjct 29507 TATACCTTCAACAGAAGCAAAAGCAATTAATCTTTCAGCAAA 29466
>seq25
Length=399112
Score = 82.4 bits (90), Expect = 9e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
|| || ||| |||||| |||||||| | || || | ||||| ||| ||||||
Sbjct 188711 GCGAAGTCTGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAAGGTGAGTCCA 188652
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| | | |||||| || | |||||| || |||||||| ||||||||||| |||
Sbjct 188651 GGCATCAATGATCTTTTTTTGATCCAAAATATAGCACAAAATGAACCAGAAAAGAAAATG 188592
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653
|| || ||| | || || || | || | ||||||||
Sbjct 188591 CCTTCAACAGAAGCAAAGGCAATTAATCTTTCAGCAAA 188554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588958728278800
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |