Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq1532 150 5e-32 >seq1532 Length=1741 Score = 150 bits (166), Expect = 5e-32 Identities = 300/433 (69%), Gaps = 16/433 (4%) Strand=Plus/Plus Query 26915 CCAACCGATGTTCACGTCCTGCAACAGCGGGTTCGCTGCTTTGTCCGTCGACAGTGCCGC 26974 ||| ||||||||||||||||||| || ||||| || | ||| ||| ||||| Sbjct 1117 CCAGCCGATGTTCACGTCCTGCAGCATGGGGTTGGCCACGCGGTCGGTCTGGGCCGCCGC 1176 Query 26975 CTTTACGCCGTTCCAGCCGATCATGATCCGGTCGAGCGCAGACTGGTTGAGGATCACATT 27034 | |||||||||||||||||||||||||||| | | ||| || |||||| ||| Sbjct 1177 GCTGGTGCCGTTCCAGCCGATCATGATCCGGTCGCGGCCCTGCTGTTTCAGGATCGCATC 1236 Query 27035 GCGGAT--GCGTTGCTGGAAGTCGGGGAATTTCGC-CCAGGCGTCGAGCTTGCGGTACGT 27091 ||| || |||| |||||| || || | | || ||| || || | | | || | Sbjct 1237 GCGCATCAGCGT--CTGGAATTC-CGGTTTGTGGCGCCAAGCATCCATCAGGGCATA-GG 1292 Query 27092 AATG-GCCGTGTCGTAGTCGGTTTTCTCGCAGCGGTAGCGGTTGCTGTCCAGCGCCG--- 27147 | || ||| ||| | ||||| |||| |||| |||||||| ||| | | |||| | Sbjct 1293 ACTGCGCCCAGTCAAAATCGGTCTTCTTGCAGAGGTAGCGG-CGCTTTTCCGCGCTGTCA 1351 Query 27148 -TCGGGTCGATCGGCTGGCGTTCG--GCCTTCG-TCGTGTCGGTGCGGCTCGCGATCGGA 27203 |||||||| |||| | ||| | ||| || | ||||||||||| | ||||| | Sbjct 1352 TTCGGGTCGGTCGGGTTGCGGCGGGTGCCGCCGCTGGTGTCGGTGCGACCGGCGATGGTG 1411 Query 27204 CCGGATACCGACAGGCCGAGCTTTTCGCCTTCCAGCTCGGTCACGGGCAGGATGTTGATG 27263 | || || | | | ||| | |||||| | ||| |||| || | ||||||||| Sbjct 1412 CGGGCGGTGGAAATGGCCAGCACCTGACCTTCCTGATCGATCACCGGAATGATGTTGATC 1471 Query 27264 CTCTTCAGGAATGCGCTCGATTCCTGCATTTTGGTTTCGAGCGTTTGCTGGACGGACGGC 27323 ||||||||| || |||||||| || ||| ||||||| | |||| ||||||||| Sbjct 1472 GAATTCAGGAATTCGGACGATTCCTTGATCTTGTCTTCGAGCTTCTGCTCGACGGACGGG 1531 Query 27324 TCGACGGCGAATT 27336 |||| ||||||| Sbjct 1532 GCGACCGCGAATT 1544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129650787990484