Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq701 190 3e-43 >seq701 Length=18236 Score = 190 bits (210), Expect = 3e-43 Identities = 310/444 (70%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 201043 TTCTATTCTAGTTCTGCTTGTATGTACCCAGAACATAATCAATTAGATCCTGACAATCCT 201102 ||||||||| |||||||||||||| ||||| |||||||| ||||||| | ||||| Sbjct 6610 TTCTATTCTTCATCTGCTTGTATGTATCCAGAGCATAATCAGCAAGATCCTAATAATCCA 6669 Query 201103 GATTGCCGTGAAAATTCCGCCTACCCAGCAAATCCAGATTCAGAATACGGATGGGAAAAA 201162 | || |||| ||| || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct 6670 AACTGTGAAGAAAGTTCTGCTTACCCTGCAAATCCGGATTCTGAATATGGTTGGGAAAAA 6729 Query 201163 CTCTTTTCGGAGAGACTATATTTTGCCTATGCTCGCAACTATGACCTTGACGTTTCTGTG 201222 || ||||| || | || ||||| || | | | |||||| | | |||| || Sbjct 6730 CTTTTTTCAGAACGTCTTTATTTAGCTTTCAATAGAAACTATAAGTTAAACGTAAGAGTA 6789 Query 201223 GCTCGCTATCATAACATTTTTGGTCCTGAAGGGACTTGGGATGGCGGAAAAGAAAAAGCC 201282 || | | ||||| ||||| ||| || || |||| || || |||||||| || Sbjct 6790 GCAAGATTCCATAATATTTTCGGTGAGTTTGGAACATGGGTGGGTGGTAAAGAAAAGGCA 6849 Query 201283 CCTGCAGCCATCTGTAGGAAGGTCGCATCTCTACCAGAAACAGGAGGCACCATTGAGGTG 201342 || ||||| || ||||| || | ||| | ||||| || ||||| || || || Sbjct 6850 CCAGCAGCAATGTGTAGAAAAGCTGCA---GAAACAGAAGATGGTGGCACAATAGAAGTT 6906 Query 201343 TGGGGAGACGGTTTGCAAACTAGATCGTTCCTTTACATTGATGAGTGTATCGAAGCAACT 201402 |||||||| || |||||| | || ||| | | | |||| ||| | |||||| Sbjct 6907 TGGGGAGATGGACAGCAAACGCGTTCTTTCTTGCATGTAAATGAATGTGTAGAAGCAGTA 6966 Query 201403 CGTAGGTTGATTGATTC----TGACTTTGAAGGACCTGTAAACATTGGTTCTGAAGAGAT 201458 | ||| |||| ||| | ||| || ||| ||||||||||| ||||| ||||| || Sbjct 6967 CTTAGATTGA-TGAGACAAGATGATTTCTTAGGGCCTGTAAACATCGGTTCAGAAGAAAT 7025 Query 201459 GGTCACTATCAATGAGTTGGTAGA 201482 ||| || |||||| | |||| ||| Sbjct 7026 GGTAACCATCAATCAATTGGCAGA 7049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745059750482080