Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq379 484 7e-132 seq253 453 1e-122 seq25 434 1e-116 seq504 242 4e-59 seq33 134 2e-26 seq138 122 1e-22 seq124 104 3e-17 >seq379 Length=55362 Score = 484 bits (536), Expect = 7e-132 Identities = 1146/1727 (66%), Gaps = 25/1727 (1%) Strand=Plus/Plus Query 47024 ATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGA 47083 ||| ||||| || ||||| ||| ||| |||||||||||||| |||| |||||| Sbjct 3721 ATAGATACCTGTTTTTAATCCTTTCTCCCAAGCATAGAAATGCATAGATGTTACTTTAGA 3780 Query 47084 ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCT 47143 | | ||||||| ||||| ||||| | |||||||||| ||||||||||| | |||| Sbjct 3781 CATATTTGGTTCTGCCATATGGATATTTAAGGATTGACTCTAATCAATAAATGGAGCTCT 3840 Query 47144 ATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTG 47203 | || ||||| || ||| ||| | ||| | ||||||||| || |||||||| | | Sbjct 3841 AGAAGTTGCCAAATTTAATATAGCTTTTTAGGATATCTCCCAAACAGTTTTATATAATGA 3900 Query 47204 TTTAATGTCTTCTGGGAGAT----TAGTATTTTGAATAGATCCTCCgttttctataattt 47259 ||| || | | || | | || |||| | | ||| || || ||| | || Sbjct 3901 TTTGATATTATTAGGAATTTCTTCTA-TATTCTAGACAGAACCATTATTCATTATTAATT 3959 Query 47260 tgttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGAT 47319 | || || | || | || ||| | ||| |||| |||| | | | |||||||| Sbjct 3960 TATTCTTGATTTGAGGTGTCCATAAATTTAATTCAATTAAATCATCAACTAAATGAGGAT 4019 Query 47320 TAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTT 47379 | | | ||||||||||| | ||||| | |||| |||||| |||||||||||| Sbjct 4020 TGATACACACAAATTCTCCAGCCAAAACTCTTCTTGTATAGATATTAGTTGTATATGGTT 4079 Query 47380 CTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTA 47439 | | |||||||||||| || ||||| | ||||||||||| ||||| | ||||| || Sbjct 4080 CAAATGATTCATTATTTTAAAGAATTTAACTTGTTGATGCTGTTGGCATAGGTGCAATTA 4139 Query 47440 ATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAA 47499 |||| |||||| | |||||||||| ||| | |||||||| | | Sbjct 4140 ATAAAGAATTTCTCATTCCATATTTTATTATATTCTATTTGAGAGTATTCCAATCATATA 4199 Query 47500 GATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAAC 47559 || | |||| ||| ||| | |||| ||| | |||||||| | ||| || Sbjct 4200 -ATTT--TGGAGTTACACCCCACATATCAAATTACAAAATTCCTTATGATGCTGGACTAC 4256 Query 47560 CATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCAC 47619 | || | |||| |||||| || || | || | |||| || | || |||| | Sbjct 4257 CTGTAAAAGTTTCATAAGGTCCAAATTTCTATGCTAATTCAAAAGATCTTTAACATGCCC 4316 Query 47620 TATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTG-CTTCTGATGATTCAAAA 47678 |||||| || |||||||| || || || | |||| | | ||| ||| ||||| Sbjct 4317 CATAATAGATAGTTTCAAAAATCTTAGCATTCA-ATTCTAAGGCATCTTCTGAATCAAAT 4375 Query 47679 GGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTA 47738 || |||| |||||| || |||| || || || ||||| |||||| Sbjct 4376 GGTATTTTCATTCTTTATAATGCATCTGCAAAACCTTAGACTCCTATTCCAATAGGTCTA 4435 Query 47739 TGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTA 47798 || |||||||| | || |||| | | |||||| ||| | ||| || | | || Sbjct 4436 TGTCTTTTATTACTGTATTCTGCTTATTTAACTGGATAAAAGTTCAAATCAATTACTATA 4495 Query 47799 TTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTA 47858 || ||| ||| || |||| || ||||||||| | ||| Sbjct 4496 TTAAGATTTGTCGTGATTAATTTAGTAATCTCCAACAATTAATCAAAATCAAAAGTTTTA 4555 Query 47859 TTTA---TAACAAACCTAT-TAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATT 47914 | | | | ||| | | ||| | ||| || |||||||| ||||| | |||| Sbjct 4556 TCTTCTTTGATTAACTTTTATAAATTA-ATACTAGCAAGATTACAAACAGCAATTTCATC 4614 Query 47915 TGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATT 47974 ||| ||| ||| || ||||||| ||||||||||| || ||| || ||||| | ||| Sbjct 4615 TGGTGATGTAAATTAGATAATTTCAGTACATAGATTACTACTTTTTATTGTACCTAGATT 4674 Query 47975 TTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTC 48034 | |||||| | | || || || || || || | |||| | ||| ||||||| Sbjct 4675 CTTTTGATTACTTTTCTAATTGCAAGCATCTTTATATAACATATATGGTAATCCAGTTGA 4734 Query 48035 TATCTGAGATTCAATGATAGATTTCCA-AACAGTCCTAGCCTTTATAACAGCTCTAGCTT 48093 ||| |||| ||||| || || ||| || || |||||||| || | ||||| | Sbjct 4735 TATTTGAGCATCAATAATTTCTTACCATAATTGT-CTAGCCTTCATTGTAACTCTACCCA 4793 Query 48094 TATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTA 48153 |||| | ||| |||| | | || || || | ||||| | ||||| ||| | | | Sbjct 4794 TATTTTTTGATTCATATTCAATGTACAATTTGTTGAATTCTTAACCATA-ACAATCTTAA 4852 Query 48154 A-CCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTC 48212 | || ||||||||||| ||||||||||| | |||||| ||||| ||||||||| | Sbjct 4853 AGACCTGGACATTCATTTGGACACATCAAAGTCCAATCTGAATCATCTTTTACTCTTTAC 4912 Query 48213 ATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTG 48272 ||||||| |||||||||||| | | ||| ||||||||| || | ||| ||||||| | Sbjct 4913 ATAAATAAATCTGGTATCCATAAACCTAAAAATAAATCTCTTGCTCTCTATTCTTCAATT 4972 Query 48273 CCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATA 48331 ||| |||| || | || | |||||| | || |||||| |||||||||||||| ||| Sbjct 4973 CCATGATTCTTTCTCAATTATAAGAAACT-TATAATATCACTATGCCATGGTTCTATATA 5031 Query 48332 TATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTT 48391 || || | | ||| || |||| |||||||| ||||| |||||| || |||| || Sbjct 5032 AATAGCAAATGATCCTTTTCTTTTACCACCTCCTTAATCTACATATCTTGCTGTATCATT 5091 Query 48392 ATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACT 48451 | | || | ||||| || || | |||||| ||| ||||| ||||| ||||||||| Sbjct 5092 AAACACCTTCAACATAGGCACTAAACCATTGCTTATTCCATTTGTTCCTCTAATATAACT 5151 Query 48452 TCCACTAGCTCTTATATTACTAATTGAAATA--CCTATACCACCTGCCATTTTAGATATT 48509 | | ||| || || | || | || ||||| || || || ||| ||| Sbjct 5152 ATCTTATGATCTGATCTT--TGATACACTTAATCCTATTCCTCCAGCTGACTTACTGATT 5209 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 |||||||| | || || || ||||| || |||||||| |||||| | ||||| ||| Sbjct 5210 AGAGCACATCTCTTGAGAGTCTCATATATACCTTCTATTGAATCATCAACCATATCCAAT 5269 Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629 |||||||| ||||||| |||| | || || |||||||||||||| | ||| Sbjct 5270 AGAAAACATGATGACATTTAAGGATAAGGTGTGCCACTGTTAAATAATGTTGGTGTGGCA 5329 Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689 ||| | || | || | || | || | || |||| || | || | | |||| | Sbjct 5330 TGAGTGAAGTACTTTTAAGACATTAAATGGTAGGTTTAAAAGGCTGATTGAAGATCCTCT 5389 Query 48690 TGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 | ||| ||||| ||| || | ||| || | |||| |||||||| Sbjct 5390 TTATGAATACCAATACTGACTCTCATCAATAATTATTATGGTCTTTC 5436 >seq253 Length=82967 Score = 453 bits (502), Expect = 1e-122 Identities = 696/994 (70%), Gaps = 40/994 (4%) Strand=Plus/Minus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTTT 18673 |||| ||| |||||| || ||| || || | || | |||| ||||| ||||| Sbjct 29973 AAAAGTCAGCATCCATAGTAAATACTTTATCCTATTTTTTACTCATGACTCCAGCTTTTT 29914 Query 18674 GATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCC 18732 ||| || |||||||| |||| || ||||||||||| || | ||| ||||| ||| ||| Sbjct 29913 AATAATCTCCAACTCTTCTTTCGAAAAAATTAGTTTTACCTTGTAAAGATAT-CATATCC 29855 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792 || | ||||| ||||| ||| |||||| ||||| ||||||| | |||| || | Sbjct 29854 ATCCATTCAAAAGGATTCTTTGAATTATAAATTTTAGGAGCTCCTAATGCAAATATTAAT 29795 Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852 ||||| || ||||||| ||||||| |||||||||| | ||||||| || ||||||| Sbjct 29794 CTATCTGCAACAAATTCAATATATTATTTCATCATATTAGAATTCATACCAATTAATTCT 29735 Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGAT 18912 || | || || || ||| |||||||| ||| || | || || ||| || || Sbjct 29734 ACTGATAAAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGCAGATGAAATTATTTCA 29675 Query 18913 ACAACTCTATCTTCATTAGG-AGGGTATAGA--AGATGTTTAAACATCAAACATGCAAAA 18969 || ||| || |||| | ||| || | |||||| | | | ||| || || Sbjct 29674 TGAATTCT---TTAATTACTTAATTTATTGATTAAATGTTTGTAAAGTAGACAAGCGAAG 29618 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || ||| || || || ||||| || |||||||| |||||||| | ||||||||| Sbjct 29617 TCTGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTGAGTCCAGGCATC 29558 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | | ||||||||||| |||||| || | | |||||| |||||||||||||||||||| Sbjct 29557 AATGATCTTTTTTTTATCCAGAAAATGGCACAAAATGAACCAGAAAAGAATATACCTTCA 29498 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 || | |||||||||| || |||||| || | | |||||||| || |||||||||| Sbjct 29497 ACAGAAGCAAAAGCAATTAATCTTTCAGCAAAT---GAATCATTATCATTAATCCATTTC 29441 Query 19150 AGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATAC 19209 | ||||| |||||||||| || | |||| | || |||| || || |||||| Sbjct 29440 ATAGCCCACATTGCCTTCTTTTGTATAACAGGCACATTATCAATAGCATGAAGTAGATAA 29381 Query 19210 ATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGA 19269 | |||| | ||| | | || | ||| ||||||| || ||||||||||| Sbjct 29380 TTTTTTTCATTTTCATCAGTTATGTAAGTATCAATCAATAGTGAATAGGTTTCTGAATGA 29321 Query 19270 ATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCA 19329 ||||| || ||||| | || |||||| || |||||||| ||||||| | | ||||| Sbjct 29320 ATATTCTCCATAGCTAACTAAAATCCATAGAAACATCTAGCTTCTGGAACTTAAACTTCT 29261 Query 19330 CTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCT 19389 |||||||| || |||| |||||||| || || ||||||||||||||||| || || Sbjct 29260 GTACAAAATTATTAAGCCAAGTTTTCATTCACAATACCATCACTAGCTGCAAAGAAGGCA 29201 Query 19390 AATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATAT-- 19447 | ||||| ||||||||||| |||||||||||||| | | | | |||||| |||| || Sbjct 29200 AGTACATACTTAATAAAATGCTTTTCATCTGAGGTAAGTTTTTCCCAATCTTTAAGATCC 29141 Query 19448 ---------------------------CTTTAGATAAATCTACTTCTTCAACTGTCCAAA 19480 ||| | ||||||||| ||||||| ||||||| | Sbjct 29140 TAAAATTTTATTACTTTTATTATCTTACTTAATATAAATCTATTTCTTCAGCTGTCCAGA 29081 Query 19481 AAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAA 19540 || || | || ||||||||| ||||| |||||| |||| || ||||| | | Sbjct 29080 AACTTGCTTTATGTTATTTATACATATTCCAAATATCATTGTATTTAATTGGAAAGAGTA 29021 Query 19541 CAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 ||||||||||| |||| ||| | || ||| || Sbjct 29020 CAAATCTATTTGGATTTGGTTTCAAAAGAGGCTC 28987 >seq25 Length=399112 Score = 434 bits (480), Expect = 1e-116 Identities = 697/998 (70%), Gaps = 49/998 (5%) Strand=Plus/Minus Query 18614 AAAAATCAACATCCAAAGAAAAAGAATTCTCTTCATTAGAATTCATTACTCCCATTTTTT 18673 |||| ||| |||||| || ||| || |||| || | |||| ||||| ||||| Sbjct 189061 AAAAGTCAGCATCCATAGTAAATACTTTATCTTATTTTTTACTCATAACTCCAGCTTTTT 189002 Query 18674 GATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT-TCC 18732 | || || |||||||| |||| |||||||||||||| || | ||| || || ||| ||| Sbjct 189001 GGTAATCTCCAACTCTTCTTTCGAAGAAATTAGTTTTACCTTATAAGGAGAT-CATATCC 188943 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792 || | ||||| ||||| ||| |||||| ||||| ||||||| | |||| || | Sbjct 188942 ATCCATTCAAAAGGATTCTTTGAATTATAAATTTTAGGAGCTCCTAATGCAAATATTAAT 188883 Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852 ||||| |||||||||| ||||||| ||||| | || | |||||||||| ||||||| | Sbjct 188882 CTATCTGCTACAAATTCAATATATTATTTCATTAAATTAGAATTCATTCCAATTAATTCA 188823 Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAATAGAT 18912 || ||||| || || | | |||||||| ||| || | || || ||| ||||| Sbjct 188822 ACTGGTAGAGCTTCACTGATAAATTCTTTTTCAATTTCAACAGCAGATGAAATAATTTCA 188763 Query 18913 ACAACTCTATCTTCATTAGG-AGGGTATAGA--AGATGTTTAAACATCAAACATGCAAAA 18969 || || || |||| | ||| | | |||||| | | | ||| || || Sbjct 188762 TGAATTCG---TTAATTACTTAATTTATTAACTAAATGTTTGTAAAGAAGACAAGCGAAG 188706 Query 18970 TCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATC 19029 || ||| || || || ||||| || |||||||| ||||| || | ||||||||| Sbjct 188705 TCTGTATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAAGGTGAGTCCAGGCATC 188646 Query 19030 AGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCT 19089 | | ||||||||| | ||| ||||||| | |||||| ||||||||||| || ||||| Sbjct 188645 AATGATCTTTTTTTGATCCAAAATATAGCACAAAATGAACCAGAAAAGAAAATGCCTTCA 188586 Query 19090 ACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTC 19149 || | ||||| |||| || |||||| || | | ||||||||||| |||||||||| Sbjct 188585 ACAGAAGCAAAGGCAATTAATCTTTCAGCAAAT---GAATCATTATTATTAATCCATTTC 188529 Query 19150 AGTGCCCAATCAGCCTTCTTTT---TTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206 | |||||| || ||||||| ||||| |||| | ||||||| || | ||| Sbjct 188528 ATTGCCCACATTGCTTTCTTTTAAATTACA---GGCACATTATCTATAGCATGGAGAAGA 188472 Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT--TTCTG 19264 || | |||| | ||| | | ||| | ||| ||||| || || | || ||| | Sbjct 188471 TAGTTTTTTTCATTTTCATCAGTTATATAGGTATCAATCAA--AAGTGAATATGTTTCAG 188414 Query 19265 AATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTA 19324 |||||||||| || |||||||| | |||||| ||||||||||| ||||| | | |||| Sbjct 188413 AATGAATATTCTCCATAGCCATTTAAAATCCATAAAAACATCTAGCTTCAGGAACTTGTA 188354 Query 19325 CTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAA 19384 |||| |||| ||| || |||| |||||||| ||||| |||||||| |||||||| | Sbjct 188353 CTTCTGTACAGAATTATTAAGCCAAGTTTTCATTTACTATACCATCACTTGCTGCAAAGA 188294 Query 19385 ATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAA 19444 | || | |||| |||||||| || |||||||||||||| | | | | |||||| |||| Sbjct 188293 AAGCAAGGACATACTTAATAAAGTGCTTTTCATCTGAGGTGAGTTTTTCCCAATCTTTAA 188234 Query 19445 TATC------TTT----------------------AGATAAATCTACTTCTTCAACTGTC 19476 ||| ||| | | ||||||| ||||||| ||||| Sbjct 188233 GATCCTAAAATTTTATTACTTTAATATAATACCTAATACAAATCTATTTCTTCAGCTGTC 188174 Query 19477 CAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAAT 19536 || ||| || | || |||||||| ||||| |||||| ||||| || ||||| Sbjct 188173 CAGAAACTTGCTTTATGTTACTTATACATATTCCAAATATCATTATATTTGATTGGAAAG 188114 Query 19537 ATAACAAATCTATTTTTATTTTCTTTAAGAATAGGTTC 19574 | ||||||||||| |||| ||| | || ||| || Sbjct 188113 AGTACAAATCTATTAGGGTTTTGTTTTAAAAGAGGCTC 188076 >seq504 Length=36300 Score = 242 bits (268), Expect = 4e-59 Identities = 809/1243 (65%), Gaps = 52/1243 (4%) Strand=Plus/Minus Query 47614 ATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCT-TGCTTCTGATGAT 47672 |||| | ||| || ||||||||||| |||||| || | |||| ||| ||| ||| Sbjct 32504 ATGCCCCATAGTAAATTGTTTCAAAGATTTTTGCATTCA-ATTCTAATGCATCTTCTGAA 32446 Query 47673 TCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATT 47732 ||||| || |||| |||||| ||||||| || ||||| ||||| Sbjct 32445 TCAAATGGTATTTTCATTCTTTATAATGCATCTGCAAATCCTTAGACTCCAATTTCAATT 32386 Query 47733 GGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATA 47792 ||||||| |||||||| | || |||| | | ||||| ||| | ||| || Sbjct 32385 GGTCTATTTCTTTTATTACTGTATTCTGCTTATTTAACAGGATAAAAGTTCAAATCAATG 32326 Query 47793 ATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAA- 47851 || |||| ||| | ||||| ||||||| ||||||||| Sbjct 32325 ATGATATTAAGATTTATTGTTATTATTTTGTTA-TTTCTAACAATTTATCAAAATCAAAA 32267 Query 47852 --CT--TGTTATTTA--TAACAA--ACCTATTAAGTGCTATAGATGCTAGATTACATACA 47903 || | || ||| |||| || ||||| | ||| || |||||||| ||| Sbjct 32266 GTCTAATCTTCTTTGATTAACTTTTACAAATTAA-TACTA-----GCAAGATTACAAACA 32213 Query 47904 GCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATA 47963 || | |||| ||| ||| ||| || ||||||| |||||||||| || ||| ||| Sbjct 32212 GCAATTTCATCTGGTGATGTAAATTAAATAATTTCAGTGCATAGATTACTACTTTTAATA 32153 Query 47964 GTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGT 48023 || || | || | |||||| | ||||| || | || || | |||| ||||| Sbjct 32152 GTTCCAAGGTTCTTTTGATTACTTTTCGAATTACAAGCAACTTTATATAACATATAAGGT 32093 Query 48024 GTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA-AACAGTCCTAGCCTTTATAAC 48082 ||||||| ||| |||| ||||| || || ||| || || |||| || || Sbjct 32092 AATCCAGTTGATATTTGAGCATCAATAATTTCTTACCATAATTGTT-TAGCTTTCATTGT 32034 Query 48083 AGCTCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATA 48142 ||||| | |||| | || |||| | ||| || || | ||||| | |||||| Sbjct 32033 CACTCTACCCATATTTTTTGATTTATATTCAAAATACAATTTGTTGAATTCTTACCCATA 31974 Query 48143 CACATTATCTAAC--CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTT 48200 ||| | |||| || ||||||||||| ||||||||||||| |||||| ||||| | Sbjct 31973 -ACAATC-CTAAAGACCTGGACATTCATTTGGACACATCAATGTCCAATCTGAATCATCT 31916 Query 48201 TTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTT 48260 |||||||| || || |||||||||||| | | ||| ||||||||| || | ||| Sbjct 31915 TTTACTCT----TTACATTAATCTGGTATCCATAAACCTAAAAATAAATCTCTTGCTCTC 31860 Query 48261 AGTTCTTCATTGCCACTATTCCTT-TTAAGTTCAAGAAAGTCCATTATATCAGCATGCCA 48319 ||||| | | | |||| || | || | |||||| | || |||||| |||||| Sbjct 31859 TATTCTTAAATTTAATGATTCTTTCTCAATTATAAGAAACT-TATAATATCACTATGCCA 31801 Query 48320 TGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCT 48379 |||||| | ||| || || | | ||| || ||| |||||||| ||||| |||||| Sbjct 31800 TGGTTCAATATAAATAGCAAATGATCCTTTTCTTTTGCCACCTCCTTAATCTACATATCT 31741 Query 48380 GGCAGTATTGTTATAAACTCTTAACATTGGGACAAT--ACCATTTGATATACCATTGGTT 48437 || ||| ||| | || ||||||| |||||| |||||| ||| | ||| ||| Sbjct 31740 TGCTGTACCATTAAACACCTTTAACAT--AGACAATAAACCATTACTTATTCTATTAGTT 31683 Query 48438 CCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATA--CCTATACCACCTG 48495 || ||| |||| | | ||| || || | || | || ||||| || || | Sbjct 31682 CCTCTTATA-AACTATCTTATGATCTGATCTT--TGATACACTTAGTCCTATTCCTCCAG 31626 Query 48496 CCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCAT 48555 | || |||||| |||| | || || || ||| | || ||||| || ||||| Sbjct 31625 CTGACTTGCTAATTAGAACACATCTCTTGAGAGTCTCAAATATACCTTCGATTGAATCAT 31566 Query 48556 CTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATA 48615 | | ||||| ||||||||||| ||||||| |||| | ||| || | |||| Sbjct 31565 CAACCATATCCAATAGAAAACATGATGACATTTAAGGATAAGGAGTGCCCACTGTTAATA 31506 Query 48616 ATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAG 48675 |||| || | |||||| | || |||||| || | || | ||| |||| || | | Sbjct 31505 ATGTAGGTGTGGCATGAGTGAAGTATTTCTAAGACATTAAATGATAGGTTTAAAAGGCTG 31446 Query 48676 AATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTT 48735 | | | || || | | ||||| ||| || | |||||| | |||| ||||||| Sbjct 31445 ATTTGAGATTATCTTTAAGAATACCAATACTGACTCTCATTAATAATTATTATGGTCTTT 31386 Query 48736 CAACAATTTTGTTATTTATTTTCAAAAG---ATATGATTTTTCCAATGTTTTAAAACCAA 48792 | | || ||| || || | ||| ||| | |||| || |||||||| |||| Sbjct 31385 CGA----TTGGTTTTTCCCTTCCTTAAGTAAATAGCTTCTTTCTAAAGTTTTAAAGCCAA 31330 Query 48793 AATAGTTGTA-TGAAAAGTCGTTATCATTAATAATTGATGAAT 48834 || ||| || ||| || || |||| ||||||||||||| Sbjct 31329 AAAAGTCATACTGATAA-TCTCTATC----ATAATTGATGAAT 31292 >seq33 Length=369673 Score = 134 bits (148), Expect = 2e-26 Identities = 118/147 (80%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 |||||||| ||| ||||||| ||||||||| |||||| || || |||||||||||| | Sbjct 257827 ATTGTAGAATTTAGTGAAAAGATGGCAAATTTAGGAAAGATTGTAATAGTTGCAGCACTT 257886 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 |||||||| ||| | || ||||||||| ||| | |||||||| ||||| || ||||| Sbjct 257887 GATGGAACCTTTGACAGGAAACCTTTTCATAACATCTTAAATTTGATTCCTTTGGCTGAA 257946 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 |||||||||| |||||||| ||| Sbjct 257947 CGTATAACAAAACTAACAGCTGTATGT 257973 >seq138 Length=141258 Score = 122 bits (134), Expect = 1e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| |||| || ||||||||| |||||| || || || || ||||| || Sbjct 128266 ATTGTTGAATTTAGTGAGAAAATGGCAAATTTAGGAAAGATTGTTATTGTGGCAGCTTTA 128325 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 ||||| || ||| | |||||||||||| ||| |||||||||||||||| || ||||| Sbjct 128326 GATGGTACTTTTGACAGAAAACCTTTTCATAACATATTAAATTTAATTCCTTTGGCTGAA 128385 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 ||||||||||||| || || ||| Sbjct 128386 CGTATAACAAAACTTACTGCAGTTTGT 128412 >seq124 Length=157641 Score = 104 bits (114), Expect = 3e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65890 ATTGTAGAGTTTTGTGAAAATATGGCAAATAAAGGAAAAATAGTGATAGTTGCAGCATTG 65949 ||||| || ||| |||| ||||||||| ||| |||||||| ||||||||||| | Sbjct 99590 ATTGTTGAATTTAGTGAGGCAATGGCAAATTTAGGGAAAATAGTAATAGTTGCAGCTCTT 99649 Query 65950 GATGGAACATTTAAAAGAAAACCTTTTGGTAATGTATTAAATTTAATTCCATTATCTGAA 66009 ||||| |||||| | ||||| |||||| ||||| | || | ||| |||||||| ||||| Sbjct 99650 GATGGTACATTTGATAGAAAGCCTTTTCGTAATATTTTGAGTTTGATTCCATTGGCTGAA 99709 Query 66010 ACAGTAACAAAACTTACAGCTGTGTGT 66036 | || ||| | || ||||| ||| Sbjct 99710 CGTATTACTAAATTAACTGCTGTTTGT 99736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562092316159440