Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq563 91.5 4e-14 >seq563 Length=30168 Score = 91.5 bits (100), Expect = 4e-14 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 983 AGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGTGGGTGCTGGTGTTATTGA 1042 ||||||| | || |||||||| ||||| | | || ||||| ||||||||||||||||| Sbjct 771 AGCTCCTCGTTCTGGATTAGCAGCTAAAAATTTTATAGATGTTGGTGCTGGTGTTATTGA 712 Query 1043 TCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTTTAGCGATAAGCGTTTTCA 1102 | ||| | || || | | ||||| | |||||||||||| | ||||| || ||||| Sbjct 711 TGAAGATTACAGAGGAGAAATATGTGTTTTATTATTTAATTTTGGAGATAA-CGATTTCA 653 Query 1103 TATTTCAAGA-GGTGATAGGATTGCTCAGTTAATTTGTGAAAAGGCTGT 1150 | | | | || ||||| |||||||| | ||| |||| | | ||| Sbjct 652 AAGTAAATTATGGAGATAGAATTGCTCAAATGATTATTGAATATGTTGT 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138677736503976