Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq56 86.0 5e-12 >seq56 Length=265680 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || |||| | ||| || ||||| || || ||||||| ||| || ||||| || Sbjct 113496 CCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATAATCTGAA 113437 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| | || || | ||||| || ||||| |||| || | |||||| | ||| Sbjct 113436 AGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGAGGA 113377 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || |||||| || |||| | | | | ||||| | || || Sbjct 113376 ATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGGTTCTACA 113317 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || || ||||||||||| ||||| |||||||| | ||| Sbjct 113316 TCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACAT 113270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380926708279758