Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq2232 105 9e-18 >seq2232 Length=1021 Score = 105 bits (116), Expect = 9e-18 Identities = 348/523 (67%), Gaps = 26/523 (5%) Strand=Plus/Plus Query 135407 GCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGC 135466 ||| || ||||| | ||| ||||| | |||||| || | || | || || ||| || Sbjct 509 GCCTTTAACGCACATGACCTGCTTCAAGGTGTGAACAACCTCAATCAGATCGGACTGAGC 568 Query 135467 CTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTC 135526 ||||||| || ||||||||||| || ||| |||||||| | ||| || |||| Sbjct 569 AGTCATGACCTGATCAATGTCCTTGTAAGCGCCCGGAATTTCGTCCAGCACCGCATCGTC 628 Query 135527 CTTACGGCACTCCACGCCCTCGGTG---GCCTTGATCT-GGTCCTCCAGGGTGAAGGT-C 135581 ||| ||||| || || || | ||| ||| | || |||| ||| |||| | | Sbjct 629 CTTGCGGCATTCGACCCCTTGGGTCTGCGCCACCAACTCGGTC----AGGCTGAACTTGC 684 Query 135582 GCCTTGGCCTGG-GTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGA 135640 | | || ||| || || ||||| | ||||| || || || ||| |||| | Sbjct 685 GGCGTG--CTGCTGTGCGTGACATGGCGCGGCCGGCCCCATGGCTGCAACTGCAGTAGCT 742 Query 135641 GTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGAT 135700 |||| ||||| |||||||||||||||||||| ||||| ||| |||||||| Sbjct 743 GTCCTGGTTGCCTTTGCCGCGCACGATGTAGGAGCGCTGACCCATGCTGCCAGGGATGAT 802 Query 135701 CCCGAACTGGTCCTTCTGCG---CCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTC 135757 || | | | || || ||| |||| | ||||||||||||||||| ||| Sbjct 803 GCCAAGGTCG-CCATC-GCGGGCCCGA-ATAGCGCCCTTGCGGGTCACCCAGAGGTTGCG 859 Query 135758 GTCGAAGTGGAATTC-CTTCTG-GACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCC 135815 | | || ||| ||| | || || ||||||||||||||||| | ||||||| | Sbjct 860 GCCAAAATGG--TTCTCGCGTGCCACATAGTTGTGGTGGCAGTTGATGGCTTCCTGGGTG 917 Query 135816 GTCTTGAA--CGGCGGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCA 135873 || |||| || ||| | ||||| |||| ||| | | |||| ||||||||| Sbjct 918 ATCGTGAAGTCGACGG-GGATGCGACG-GCGCAGGGCGGCAATGACCGCCTCCATCATCA 975 Query 135874 TCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGC 135916 || |||||| | | ||| || |||| |||| |||| || Sbjct 976 CCTTGCGGTTCTCCAGGGCGTAGGCCTGAGCCCACTCGACTGC 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700424259456240