Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq1532 116 8e-22 seq1730 113 1e-20 >seq1532 Length=1741 Score = 116 bits (128), Expect = 8e-22 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 16334 AAACGTATGGGCGGCCTGCAGGCCGTGCGTGCGCCTTATTTCCCGGCAAATGCCCTGCTG 16393 |||| || |||||||||| |||||||| | || | |||||||| || || | || Sbjct 765 AAACAGATCGGCGGCCTGCCCGCCGTGCGCGTCCCCTTCTTCCCGGCCAACGCGATCATG 706 Query 16394 ATCACCCGTCTGGATAACCTGTCCATCTACTGGCAGGAAGATACCCGCCGCCGTTCTGTT 16453 ||||| || ||||||||||| || ||||| |||||||| ||||||||||| | Sbjct 705 ATCACGCGGCTGGATAACCTCTCGATCTATGTGCAGGAAGGCACCCGCCGCCGCCAGCTC 646 Query 16454 ATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAGTCCGTCAACGAGGCGTATGTG 16513 | || | ||| || ||||||| | |||| |||| |||||||||||| |||||| Sbjct 645 AAGGATGAGCCGGAATACAACCGGATCGCCAACTATGAGAGCGTCAACGAGGCCTATGTG 586 Query 16514 GTCGAGGACTAC 16525 ||||||| ||| Sbjct 585 ATCGAGGAATAC 574 >seq1730 Length=1430 Score = 113 bits (124), Expect = 1e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 15836 TACAAATGCGAACAGACCAACTTTGATACGGTGCTGACCTACGCAAAACTGGACCTGTGG 15895 ||| ||||| | |||| |||||| || || || ||| |||||| || |||||| ||||| Sbjct 847 TACGAATGCAACCAGAACAACTTCGACACCGTTCTGCGCTACGCCAAGCTGGACATGTGG 788 Query 15896 GCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCGTCAAGCGTCAGGCGCTG 15955 || |||||| ||||||||| ||| ||||| | ||| | | | |||||||||||| Sbjct 787 GCGCAGTTCCCCGACTTCCAGACGCGCATCCGTGATGCCTGCCTGATCCGTCAGGCGCTG 728 Query 15956 GACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAA 16015 ||| ||| | ||||| || ||| | ||||| ||| | || || | | Sbjct 727 GACACCATTTGCGTGGGCTTCAATGGCACCCACTATGCCAAGACCACCAACCGCACCGCC 668 Query 16016 AACCCGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCG 16075 || |||||||| ||||| ||||| |||||| | ||| |||||||| || || || Sbjct 667 AATCCGCTGCTTCAGGATTTCAATCGTGGCTGGCTTCAGGCGATCCGCGACGAAGCCCCC 608 Query 16076 GA 16077 || Sbjct 607 GA 606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109049761925308