Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq711 93.3 3e-14 >seq711 Length=17244 Score = 93.3 bits (102), Expect = 3e-14 Identities = 182/264 (69%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 78365 ATGATTCTTGTAAATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCC 78424 ||| || |||||||||||| | || || | || || | | ||||||||||| | | | Sbjct 10185 ATGGTTGTTGTAAATATGAACATCTCCAAAAGTATGCACATAATCTCCTACTTCTAATTC 10126 Query 78425 GCACAAATGCGCAATAAT-ATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTC 78483 || | ||||| | || || || ||||| || ||||||||||| || | | Sbjct 10125 ACAAACTTGCGCCACCATCATACACAAC-AATGCATAACTCGCAATGTTAAAAGGGACGC 10067 Query 78484 CTAAGAATACGTCACCGCTTCGTTGGTACAATTG--GCAACTTAGCTTTCCATCAACTGA 78541 | || ||||| ||| | |||| ||| |||||||| | || | |||||||| || Sbjct 10066 CCAAAAATACATCAGCACTTCTTTGATACAATTGTAGTGAC--AATTTTCCATC---TGC 10012 Query 78542 TACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGCCATATCATCTAAGTCAGCAGG 78601 ||| |||||||| || | | |||||||||| || ||||||| | || || | Sbjct 10011 TACATAAAACTGAAACAATGCATGACAAGGCGCTAAAGCCATATTTGGAATTTCGGCTGC 9952 Query 78602 ATTCCAAGCAGACACAATATGTCT 78625 |||||||||||| || ||| |||| Sbjct 9951 ATTCCAAGCAGAAACGATAAGTCT 9928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300151417862800