Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq701 208 1e-48 >seq701 Length=18236 Score = 208 bits (230), Expect = 1e-48 Identities = 471/695 (68%), Gaps = 25/695 (4%) Strand=Plus/Plus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTAT--CAGTG 139496 ||||||||||||||||| || || ||||| || || ||||||||||| ||| | ||||| Sbjct 14850 AAAGGAATTATTTTAGCCGGAGGTTCTGGTACACGTTTGCATCCATTAACTTTAGCAGTG 14909 Query 139497 TTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTC 139556 | ||||| ||| | || || || ||||||||||||||||| || || || |||| | Sbjct 14910 AGT--AAACAATTAATGCCAGTTTATGATAAACCAATGATTTATTACCCCTTATCAACAC 14967 Query 139557 TTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGAAATTCTT 139616 | || ||||| || || || || | || || || || || || ||| || Sbjct 14968 TAATGTTGGCTGGAATTAATGAGATTTTAATCATTTCTACTCCTCATGATTTGCCCCATT 15027 Query 139617 TCGAGAACTTACTAGGTAACGGTTCACAATTTGG-TGTTAGAATAGAATACGCTGTTCAA 139675 |||| || ||||| || | || | || | || ||| || | || | || Sbjct 15028 TCGAAAAATTACTGGGAGATGGCGCTCAGATAGGATGTAAGTTTTCT-TATAAAGAACAG 15086 Query 139676 GAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCT 139735 || ||| |||| || ||||| || || || | || |||||||| || || | | Sbjct 15087 CCAAGTCCTGATGGATTGGCACAGGCATTTATTCTAGGAGAAGAATTTATTGGAGATGAT 15146 Query 139736 AAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCT--AATAT---AGATAGAT 139790 ||||| || || || |||| || |||||||| ||| ||| ||| | || || | Sbjct 15147 AAAGTTGCCCTAATCCTAGGAGATAACATTTTTTATGGCTCTGGAATGTCTCAGCTA--T 15204 Query 139791 TACTTATGGAAGCTAATATGTCTGATAAAAATACG--ATATTTGCATATCGTGTAAATGA 139848 ||| | | || | | |||| | | || |||||||| |||| || || Sbjct 15205 TACAAAATGCGGCACAGA---CTGA--AGGAGGCGTAATATTTGCCTATCAAGTGGCAGA 15259 Query 139849 TCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGA 139908 || | |||||||| || || ||||| |||||| | |||| || |||| || ||||| Sbjct 15260 CCCAGAAAGATATGGCGTGGTAGAATTTGATGAACAGAATAATGCAATTTCAATTGAAGA 15319 Query 139909 AAAACCTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGA 139968 |||||| || ||||||||||||| || || ||||| ||||||||||| |||| Sbjct 15320 AAAACCACAAAACCCTAAATCTAATTTTGCTGTTCCAGGGCTATATTTCTATGATAATTC 15379 Query 139969 TGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGA 140028 ||| | ||| | || || | |||||||||||| | |||||||||| ||||| |||| Sbjct 15380 TGTAGTAGAAATTGCAAAAAATATCAAACCTTCTCCCCGTGGAGAATTAGAAATTACAGA 15439 Query 140029 TATTAACGCATATTA-CTTAGATAAGAATCAATTATCAGTTAAAGCTTTTGACAGAAGTG 140087 ||||| ||| | || || | | ||| | |||| ||| | ||||| ||| | Sbjct 15440 CATTAATGCAGAATATCTGAAACAAGGA-AAATTGAAAGTAGGTGTCTTTGATAGA---G 15495 Query 140088 GTACTACATGGTTAGATACTGGTACTATTCAGTCT 140122 | || ||||| | ||||||||||| ||||| ||| Sbjct 15496 GAACGGCATGGCTGGATACTGGTACCATTCAATCT 15530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701841817885120