Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq711 113 1e-20 >seq711 Length=17244 Score = 113 bits (124), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 45569 GTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAA 45628 || ||||| ||||| ||||| | || || ||||||||| |||| |||||| ||||| Sbjct 9682 GTAACGACCAAAAAAGTGCATTTAAAGTCTATTATTTATGAATTGCTTTGGTTTCTAAAA 9741 Query 45629 GGCGATACGAATGTTCGCTAT-TTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGC 45687 |||||||| || | ||| || || || |||||||| | |||||| | || ||||| Sbjct 9742 GGCGATACAAACATCAAATATCTTACA-GATAATGGTGTTTCCATTTGGAATGAATGGGC 9800 Query 45688 CGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGC 45747 || ||||| || |||| || ||| | ||||| || |||||| | | ||| |||| Sbjct 9801 AGACGAAAATGGAAATCTTGGTCCAGTTTACGGAGCACAATGGAGAACTTGGGAAGGCAA 9860 Query 45748 TGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAG 45796 || || ||| ||| |||||||| | | ||| | || |||||||| Sbjct 9861 AGATGGAAAAGTGGTAGACCAAATCGTAGAGGTAGTAGAGCAAATCAAG 9909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157746005271044