Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq1370 80.6 8e-11 >seq1370 Length=2138 Score = 80.6 bits (88), Expect = 8e-11 Identities = 139/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 21849 CGATGTTTCGGAGCAAGTCGTCTGGCATGGCGCAAAACTGAATAGCGAAGACTGGAAGCA 21908 ||| ||||| || |||||||| ||||||||| || ||| || || ||||| || Sbjct 1958 CGAGGTTTCTGAACAAGTCGTTTGGCATGGCCGCAAGTTGACCCCAGAGGAATGGAAACA 1899 Query 21909 CATCTTCACTGCGGCGCTTAAAGGTCAGCGCTCAGCGCCGGGAATTAACGGCGGCTTTGT 21968 | | || | || ||||| ||| ||| | | ||| || ||| | ||||||||||| Sbjct 1898 CGTTTTTTCGGCCGCGCTCAAAAAACAGGACGTGGTGCCTGGGATTGATGGCGGCTTTGT 1839 Query 21969 CGTGCTCGGGCAGTCGACCTCAAAGATGCGAGTGAGCGAATTCAGCGAACTTCTGGAGCT 22028 | || || || || || ||||||||| | ||||| | ||||| | | |||| | Sbjct 1838 GATCCTGGGCCAATCCACTTCAAAGATGACCAAGGGCGAAATGAGCGACTTGCAGGAGTT 1779 Query 22029 GATTTACGCATTCGGCGCAGAG 22050 ||| |||||| || |||||| Sbjct 1778 GATCAGCGCATTTGGTGCAGAG 1757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152229358962196