Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_020484.1 Length=147284 Score E Sequences producing significant alignments: (Bits) Value seq912 118 1e-21 >seq912 Length=5817 Score = 118 bits (130), Expect = 1e-21 Identities = 158/213 (74%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 130794 TTGTAGGCACAGGTAACAAAGTAGAAGATTTTGGTGTAGGTTTCTATACTAAGTATGGTG 130853 |||| || || || || |||||||||||||| || | ||||| ||||| || ||||||| Sbjct 842 TTGT-GGAACTGGGAATAAAGTAGAAGATTTCGGGATTGGTTTTTATACCAAATATGGTG 784 Query 130854 ATGGTGGTGTTGATATATCACCTATTGCAGA-TTGTATGAAAACAGATGTATGGAAAATT 130912 ||||||| || ||| | ||||| |||||||| |||||| ||||| || || | | Sbjct 783 ATGGTGGAGTAGATGTTTCACCGATTGCAGATTTGTAT-AAAACCGAAGTTTATGCTTTG 725 Query 130913 GCAAAAGAATTAAATATATTACAATCAATACAAGAGGCAAAACCAACAGATGGTTTATGG 130972 |||| || ||| || || | |||| || || | || | ||||||||||| | ||| Sbjct 724 GCAAGAGCTTTAGATTTACCAGAATCTATTAAAAACGCCATTCCAACAGATGGACTTTGG 665 Query 130973 GACGATGGA-AGAACAGATGAAGACCAACTTGG 131004 || | |||| ||||| |||||| | ||| |||| Sbjct 664 GATG-TGGATAGAACCGATGAACAACAAATTGG 633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471166982623040