Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq337 152 9e-32 seq287 152 9e-32 seq114 138 2e-27 seq128 134 2e-26 seq13 132 9e-26 seq56 120 5e-22 seq112 118 2e-21 seq507 104 4e-17 seq380 89.7 9e-13 seq16 86.0 1e-11 >seq337 Length=64228 Score = 152 bits (168), Expect = 9e-32 Identities = 188/257 (73%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 61549 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 61490 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 61489 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 61430 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 61429 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 61370 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| |||||||| |||||||| ||||| |||||||||| |||||| Sbjct 61369 TGGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 61310 Query 193364 attagtaaaataattat 193380 || ||| |||| || Sbjct 61309 CTTTTAAAATTAATAAT 61293 Score = 152 bits (168), Expect = 9e-32 Identities = 188/257 (73%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 63321 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 63262 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 63261 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 63202 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 63201 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 63142 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| |||||||| |||||||| ||||| |||||||||| |||||| Sbjct 63141 TGGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 63082 Query 193364 attagtaaaataattat 193380 || ||| |||| || Sbjct 63081 CTTTTAAAATTAATAAT 63065 >seq287 Length=75303 Score = 152 bits (168), Expect = 9e-32 Identities = 188/257 (73%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 765 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 706 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 705 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 646 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 645 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 586 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| |||||||| |||||||| ||||| |||||||||| |||||| Sbjct 585 TGGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 526 Query 193364 attagtaaaataattat 193380 || ||| |||| || Sbjct 525 CTTTTAAAATTAATAAT 509 Score = 152 bits (168), Expect = 9e-32 Identities = 188/257 (73%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 2776 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 2717 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 2716 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 2657 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 2656 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 2597 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatttt 193363 | ||||| || ||||| |||||||| |||||||| ||||| |||||||||| |||||| Sbjct 2596 TGGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 2537 Query 193364 attagtaaaataattat 193380 || ||| |||| || Sbjct 2536 CTTTTAAAATTAATAAT 2520 Score = 147 bits (162), Expect = 4e-30 Identities = 188/258 (73%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || ||||||||||||| | || | || | || | || || |||| || Sbjct 1771 AATTTACATTCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 1712 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 1711 ATAGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 1652 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 1651 ATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGA 1592 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgc-attt 193362 | ||||| || ||||| |||||||| |||||||| ||||| |||||||||| | |||| Sbjct 1591 TGGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACTATTT 1532 Query 193363 tattagtaaaataattat 193380 | || ||| |||| || Sbjct 1531 TCTTTTAAAATTAATAAT 1514 >seq114 Length=165420 Score = 138 bits (152), Expect = 2e-27 Identities = 188/260 (72%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||||| || |||||||| |||| | || | || | || | || || |||| || Sbjct 141201 AATTTACATTCCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTT 141142 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 141141 ATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTA 141082 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 |||||| || |||||||| || |||| ||||| | || | | |||||| || || Sbjct 141081 ATCAGGTGGAATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCATCAATAGTGTCTGA 141022 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat-tt 193362 | ||||| || ||||| || ||||||||||||| ||||| ||||| |||||||| || Sbjct 141021 TGGTTCAACATCAAGAGTGATTGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATATT 140962 Query 193363 tattagtaaaataattattt 193382 | | | |||||| |||||| Sbjct 140961 TTTAAATAAAAT-GTTATTT 140943 Score = 138 bits (152), Expect = 2e-27 Identities = 182/249 (73%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 ||||||||||||| | || | || | || | || || |||| ||||| || || Sbjct 165080 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 165139 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||||| ||| ||||||| |||||| |||||||| | ||| | || |||||| || Sbjct 165140 AGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 165199 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 |||||||| || |||| ||||| | || | | |||||| || || | ||||| Sbjct 165200 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 165259 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattt-tattagtaaa 193372 || ||||| ||||| || || |||| |||||||||||||||| ||||| |||| |||| Sbjct 165260 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTTCTATT--TAAA 165317 Query 193373 a-taattat 193380 | ||||||| Sbjct 165318 ATTAATTAT 165326 Score = 132 bits (146), Expect = 9e-26 Identities = 190/266 (71%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 193123 TAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATAT 193182 ||||||| || |||||||| |||| | || | ||| | || | || || |||||| Sbjct 153375 TAATTTACATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATAT 153316 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 |||| || || | ||||| ||| ||||||| ||||| |||||||| | ||| | || Sbjct 153315 TATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATT 153256 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 |||||| || ||||||||||| |||| ||||| | || | | ||||| || | Sbjct 153255 AATCAGGTGGAATTCCTTCTTTGTCTTAAATTTTAGCCTTGACAGCATCTATAGTGTCTG 153196 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcat-t 193361 | | || || || ||||| || |||||||| |||| ||||| ||||| |||| ||| Sbjct 153195 ATGGTTCTACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTACATAG 153136 Query 193362 ttattagtaaaa---taattatttta 193384 || | | ||||| |||||||| || Sbjct 153135 TTTTAAATAAAATGTTAATTATTATA 153110 Score = 104 bits (114), Expect = 4e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 193177 AAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATC 193236 ||||||||| || || | || ||| ||||||||||| |||||| |||||||| | | Sbjct 141622 AAATATTATGTTCTGAAATTGTCCTACCATCGTCTAATTCTTTTCCTGCAAAAATGAGTG 141563 Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296 | | || ||||| || |||||||| || |||| ||||| || || | | ||||| Sbjct 141562 TTTATTAATCAGATGGGATTCCTTCCTTGTCTTAAATTTTAGTCTTGACAACATTAATAG 141503 Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatattt 193356 | || || | ||||| || |||| |||||||| || | || ||| ||||| || | Sbjct 141502 TGTCTGATGGTTCAACATCAAGAGAAATAGTTTTTCCGGATATTAATTTAACAAAAATAT 141443 Query 193357 gcattttatt 193366 ||||||||| Sbjct 141442 ACATTTTATT 141433 Score = 100 bits (110), Expect = 5e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 193177 AAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATC 193236 ||||||||||||| || | || ||| || | |||||||| ||| |||||||| | || Sbjct 144752 AAATATTATAGTCTGAGATTGTCCTATCATGTTATAATTGTTATCCTGCAAAAATGAGTC 144693 Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296 | | || |||||| || |||||||| || |||| ||||| || | | | ||||| Sbjct 144692 TTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAACCTTGACAGTGTCAATAG 144633 Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatat 193354 | || | | ||||| ||||| || ||||| || |||| |||||||||||||| Sbjct 144632 TGTCTAATGGTTCAACACAAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATAT 144575 Score = 100 bits (110), Expect = 5e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 193177 AAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATC 193236 ||||||||||||| || | || || ||||||||| | | ||| ||||| ||||||| Sbjct 150165 AAATATTATAGTCTGAGATTGTCTTACCATCGTCTAAGTTTAATCCTGCAAAGATTAATC 150106 Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296 | | ||| || || || | ||| ||||||| || ||||| | || |||| | ||||| Sbjct 150105 TTTATTGTTCTGGGGGGAATCCCTCTTTATTTTATATTTATTTCTTGATATCTTCAATAG 150046 Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatattt 193356 |||| | || | || |||| ||| ||||| || ||| | ||| ||||| |||| Sbjct 150045 TATCTGTAGGTTGGACATCTAATACTATGGTTTTTCCGGTTGGATATTTAACAAAAATTT 149986 Query 193357 gcatttta 193364 ||||||| Sbjct 149985 ACATTTTA 149978 Score = 87.8 bits (96), Expect = 3e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 ||||||||||||| | || | || | || | || || |||| ||||| || || Sbjct 164056 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 164115 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||||| ||| ||||||| ||||| |||||||| | ||| | || |||||| || Sbjct 164116 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 164175 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 |||||||| || |||| ||||| | || | | |||||| || || | ||| | Sbjct 164176 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAGCA 164235 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcatt 193361 || ||||| || ||||| || || | || || | || |||| |||| Sbjct 164236 TCAAGAGTGATGGTTTT-CCAGTCAAGGTCTTAGCGAAAATTTACATT 164282 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 193177 AAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATC 193236 ||||||||||||| || | || || ||||||||| | | ||| ||||| ||||||| Sbjct 163127 AAATATTATAGTCTGAGATTGTCTTACCATCGTCTAAGTTTAATCCTGCAAAGATTAATC 163186 Query 193237 TCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAG 193296 | | ||| || || || | ||| ||||||| || ||||| | || |||| | ||||| Sbjct 163187 TTTATTGTTCTGG-GGGAATCCCTCTTTATTTTATATTTATTTCTTGATATCTTCAATAG 163245 Query 193297 TATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatattt 193356 | | | || | ||||||| || ||||| || ||||| | |||| || |||| Sbjct 163246 AAGCTGTAGCCAGGACTTCTAATACTAATGTTTTTCCGGTTAG-ATATTTAATAAAATTT 163304 Query 193357 gcatttta 193364 ||||||| Sbjct 163305 CCATTTTA 163312 >seq128 Length=150569 Score = 134 bits (148), Expect = 2e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||||||||| | || | ||| | ||| | || | ||||| |||||||||| || || Sbjct 58063 ACCACCTCTTAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTAAATATTATAATCTGA 58004 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || | ||| ||||| |||||||| ||||| | || |||||| || Sbjct 58003 AAGAGTTCTTCCATCTTCGAGTTGCTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGG 57944 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||||||||||| || || | || | | ||| ||||| |||| ||| || Sbjct 57943 AATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATTGTATCTGAAGGCTCTAC 57884 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttatt 193366 || ||||| || || || || || || ||||| ||||| |||| ||| ||||| Sbjct 57883 ATCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACATATTATT 57830 >seq13 Length=521119 Score = 132 bits (146), Expect = 9e-26 Identities = 199/282 (71%), Gaps = 7/282 (2%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| | || | ||| | ||| | ||| | ||||| |||| ||||| || || Sbjct 46019 ACCTCCTCTGAGTCTCAATACTAAATGAAGTGTTGATTCTTTTTAAATGTTATAATCAGA 46078 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| ||||||| ||||| |||||||||||||| | || ||||||||| Sbjct 46079 AAGAGTTCTTCCATCCTCTAATTACTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGG 46138 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 ||||||||||| |||| || || | || | | || ||||| || | |||||| Sbjct 46139 GATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATGGTATCCGATGGCTCAAC 46198 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || || || || ||||| || || || ||||| |||| ||| ||||| | || Sbjct 46199 ATCAAGTGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAAATTTACATATTATT--TTAA 46256 Query 193373 ataattattttaaataatatatactttatattttaacattat 193414 || ||||||| ||| | || | || ||| | ||||| Sbjct 46257 AT-----TTTTAAAAAATCTTTAATAAATTATTTTATATTAT 46293 >seq56 Length=265680 Score = 120 bits (132), Expect = 5e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| |||| | ||| | ||| | || | ||||| |||| ||||| || || Sbjct 113497 ACCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATAATCTGA 113438 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || | ||| ||||| |||||||| ||||| | |||||||||||| Sbjct 113437 AAGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGAGG 113378 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||||||||||| || || | || | | ||| || || |||| || || Sbjct 113377 AATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGGTTCTAC 113318 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttatt 193366 || || || ||||| || || || | ||||| ||||| |||| ||| |||| Sbjct 113317 ATCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACATAATATT 113264 >seq112 Length=167324 Score = 118 bits (130), Expect = 2e-21 Identities = 196/283 (69%), Gaps = 14/283 (5%) Strand=Plus/Minus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||| | || | ||| | ||| | || | ||||| | |||||||| || || Sbjct 45499 ACCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATATTATAATCTGA 45440 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| ||| || ||||| ||||| |||||||||||||| | || ||| ||||| Sbjct 45439 AAGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCGGGAGG 45380 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||| || || | || || | || | | |||||||| || | |||||| Sbjct 45379 GATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCAAC 45320 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattttattagtaaa 193372 || || || || || ||||| || || || || ||||| |||| ||| ||||| | || Sbjct 45319 ATCAAGTGTGATGGTCTTACCCGTAAGGGTCTTAACAAAAATTTACATATTATT--TTAA 45262 Query 193373 ataattattttaaa-------taatatatactttatattttaa 193408 || ||||||| ||||| || |||||||| ||| Sbjct 45261 AT-----TTTTAAAAAATCTTTAATAAATTATTTATATTCTAA 45224 >seq507 Length=36014 Score = 104 bits (114), Expect = 4e-17 Identities = 164/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 ||||||||||||| | || | || | || | || || |||| ||||| || || Sbjct 35714 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 35655 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 | ||||| ||| ||||||| ||||| |||||||| | ||| | || |||||| || Sbjct 35654 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 35595 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 |||||||| || |||| ||||| | || | | |||||| || || | ||||| Sbjct 35594 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 35535 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGtttttacaaatatttgcattt-tatt 193366 || ||||| || ||||| || || | || || || || |||| ||||| |||| Sbjct 35534 TCAAGAGTGATGGTTTTTCCAGTCAAGGTCTTAACGAAAATTTACATTTCTATT 35481 >seq380 Length=55217 Score = 89.7 bits (98), Expect = 9e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 22515 CACGGATTTCATGTGCATGAATATGGCGATTTGAGCAACGGATGTACATCAGCTGGAGAG 22574 || ||| ||||| | ||||||| ||| ||||| || || |||||| || |||| ||| Sbjct 13288 CATGGAATTCATATTCATGAATTTGGTGATTTAAGTAATGGATGTGCAACAGCAGGACCT 13347 Query 22575 CATTTTAATCCATTTAATAAAAATCACGGAAATATTACGGATTACGAAAGGCATTTAGGG 22634 ||||| ||||||||| | || | || ||| | | |||| | |||| ||| | ||| Sbjct 13348 CATTTCAATCCATTTGAACAAGAACATGGAGGTCCTTTGGATGAGAAAAGACATGTGGGG 13407 Query 22635 GATTTGGGAAATATAAA 22651 |||||||||||||| || Sbjct 13408 GATTTGGGAAATATTAA 13424 >seq16 Length=469942 Score = 86.0 bits (94), Expect = 1e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 22497 GGACTATCTAAAGGATTGCACGGATTTCATGTGCATGAATATGGCGATTTGAGCAACGGA 22556 |||||||| | |||||||| ||||||||| | ||||||| ||| |||| | ||| ||| Sbjct 269569 GGACTATCAGATGGATTGCATGGATTTCATATTCATGAATTTGGTAATTTAATCAAAGGA 269510 Query 22557 TGTACATCAGCTGGAGAGCATTTTAATCCATTTAATAAAAATCACGGAAATATTACGGAT 22616 |||| ||| |||||| |||| ||||| | |||| || || | | ||| Sbjct 269509 TGTATATCTGCTGGACCTCATTACAATCCTCATGGTAAATTGCATGGGGGTCCAAAAGAT 269450 Query 22617 TACGAAAGGCATTTAGGGGATTTGGGAAAT 22646 || ||||| ||| | || |||||||||||| Sbjct 269449 TAAGAAAGACATGTTGGTGATTTGGGAAAT 269420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899628017634720