Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq253 273 4e-68 seq25 255 1e-62 seq114 163 6e-35 seq128 152 1e-31 seq112 129 1e-24 seq56 125 1e-23 seq13 116 7e-21 seq260 93.3 8e-14 >seq253 Length=82967 Score = 273 bits (302), Expect = 4e-68 Identities = 511/748 (68%), Gaps = 24/748 (3%) Strand=Plus/Minus Query 49573 CTTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTT--- 49629 ||| ||| ||||| | || ||| | ||||| ||||| || | ||||||| ||||| Sbjct 29874 CTTGTAAAGATATCATATCCATCCATTCAAAAGGATTCTTTGAATTATAA-ATTTTAGGA 29816 Query 49630 -CTCCTATCAATACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAAT 49688 |||||| || || ||| ||||||||| || |||||||||| ||||| | ||| | Sbjct 29815 GCTCCTA---ATGCAAATATTAATCTATCTGCAACAAATTCAATATATTATTTCATCATA 29759 Query 49689 TCACAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatt 49748 | | |||||||||| | ||||| | || ||| || ||| ||||||||||||||| ||| Sbjct 29758 TTAGAATTCATACCAATTAATTCTACTGATAAAGCTTCACTAATAAATTCTTTTTCAATT 29699 Query 49749 tctacagcttgtttaattat--cat-aattatattattttttgataatttatatttaata 49805 || ||||| | |||||| ||| |||| | | ||| || ||||||| | | | Sbjct 29698 TCAACAGCAGATGAAATTATTTCATGAATTCTTTAATTACTT---AATTTATTGATTAAA 29642 Query 49806 tgattcgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAAT 49865 || || || | || ||| || || || ||||| | ||| || || || || || ||| Sbjct 29641 TGTTTG---TAAAGTAGACAAGCGAAGTCTGTATGAAGACCTTCATCTCTTGAAATTAAT 29585 Query 49866 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 49925 ||||| ||| || | ||| ||||| ||| ||| ||||| | ||| || || | | Sbjct 29584 TCATTTGAAAATGTGAGTCCAGGCATCAATGATCTTTTTTTTATCCAGAAAATGGCACAA 29525 Query 49926 AAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAAC 49985 || || ||||||||||||||| || ||| | ||||| || |||| |||| | ||| Sbjct 29524 AATGAACCAGAAAAGAATATACCTTCAACAGAAGCAAAAGCAATTAATCTTTCAGCAA-- 29467 Query 49986 ATTAAT--TTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAG 50043 || ||| ||||||| || ||||| || |||||||| ||| || |||| ||| || Sbjct 29466 ATGAATCATTATCAT-TA--ATCCATTTCATAGCCCACATTGCCTTCTTTTGTATAACAG 29410 Query 50044 GTATATTTTCTATAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNN 50103 | | ||| || ||||| | || || | ||||||||||| Sbjct 29409 GCACATTATCAATAGCATGAAGTAGATAATTTTTTTCATTTTCATCAGTTATGTAAGTAT 29350 Query 50104 NNATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAA 50163 || |||| ||||| |||| ||||| | | |||||||||| | |||| ||| | Sbjct 29349 CAATCAATAGTGAATAGGTTTCTGAATGAATATTCTCCATAGCTAACTAAAATCCATAGA 29290 Query 50164 ATTGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATA 50223 | ||| ||||||| | | |||||| | | | ||| || | | || || ||| | Sbjct 29289 AACATCTAGCTTCTGGAACTTAAACTTCTGTACAAAATTATTAAGCCAAGTTTTCATTCA 29230 Query 50224 CAATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTAT 50283 ||||||||||| ||||| ||||| || | || || ||||||||||| ||||||| Sbjct 29229 CAATACCATCACTAGCTGCAAAGAAGGCAAGTACATACTTAATAAAATGCTTTTCATCTG 29170 Query 50284 CTTTTAAATTTTCCCAAGATTCAAGATC 50311 | | ||||||||| || |||||| Sbjct 29169 AGGTAAGTTTTTCCCAATCTTTAAGATC 29142 >seq25 Length=399112 Score = 255 bits (282), Expect = 1e-62 Identities = 508/748 (68%), Gaps = 24/748 (3%) Strand=Plus/Minus Query 49573 CTTCTAATGATATTAAATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTT--- 49629 ||| ||| || || | || ||| | ||||| ||||| || | ||||||| ||||| Sbjct 188962 CTTATAAGGAGATCATATCCATCCATTCAAAAGGATTCTTTGAATTATAA-ATTTTAGGA 188904 Query 49630 -CTCCTATCAATACATATAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAAT 49688 |||||| || || ||| ||||||||| ||||||||||||| ||||| | |||||| Sbjct 188903 GCTCCTA---ATGCAAATATTAATCTATCTGCTACAAATTCAATATATTATTTCATTAAA 188847 Query 49689 TCACAATTCATACCCAATAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatt 49748 | | ||||||| || | ||||| || ||||| || ||| |||||||||||||| ||| Sbjct 188846 TTAGAATTCATTCCAATTAATTCAACTGGTAGAGCTTCACTGATAAATTCTTTTTCAATT 188787 Query 49749 tctacagcttgtttaat--tatcataattatattattttttgataattta-tatttaata 49805 || ||||| | ||| | |||| | | ||| || | ||||||| || ||| | Sbjct 188786 TCAACAGCAGATGAAATAATTTCATGAATTCGTTAATTACT--TAATTTATTAACTAA-A 188730 Query 49806 tgattcgcatatattaaACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAAT 49865 || || || | | ||| || || || ||||| | ||| || || || || || ||| Sbjct 188729 TGTTT---GTAAAGAAGACAAGCGAAGTCTGTATGAAGACCTTCATCTCTTGAAATTAAT 188673 Query 49866 TCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCA 49925 ||||| ||| || | ||| ||||| ||| ||| ||||| | ||||||||| | | Sbjct 188672 TCATTTGAAAAGGTGAGTCCAGGCATCAATGATCTTTTTTTGATCCAAAATATAGCACAA 188613 Query 49926 AAACTACTAGAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAAC 49985 || || ||||||||| || || || ||| | ||||| || |||| |||| | ||| Sbjct 188612 AATGAACCAGAAAAGAAAATGCCTTCAACAGAAGCAAAGGCAATTAATCTTTCAGCAA-- 188555 Query 49986 ATTAAT--TTATCATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAG 50043 || ||| |||| || || ||||| || || ||||| |||||| |||| || || Sbjct 188554 ATGAATCATTATTAT-TA--ATCCATTTCATTGCCCACATTGCTTTCTTTTAAATTACAG 188498 Query 50044 GTATATTTTCTATAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNN 50103 | | ||| |||||||| | | | | |||||||||| Sbjct 188497 GCACATTATCTATAGCATGGAGAAGATAGTTTTTTTCATTTTCATCAGTTATATAGGTAT 188438 Query 50104 NNATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAA 50163 || || | ||||| |||||||||| | | |||||||| |||| |||| ||||| Sbjct 188437 CAATCAAAAGTGAATATGTTTCAGAATGAATATTCTCCATAGCCATTTAAAATCCATAAA 188378 Query 50164 ATTGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATA 50223 | ||| ||||| | | || ||||| | | ||||| || | | || || ||| || Sbjct 188377 AACATCTAGCTTCAGGAACTTGTACTTCTGTACAGAATTATTAAGCCAAGTTTTCATTTA 188318 Query 50224 CAATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTAT 50283 | ||||||||| |||||| ||||| || | || || |||||||| || ||||||| Sbjct 188317 CTATACCATCACTTGCTGCAAAGAAAGCAAGGACATACTTAATAAAGTGCTTTTCATCTG 188258 Query 50284 CTTTTAAATTTTCCCAAGATTCAAGATC 50311 | | ||||||||| || |||||| Sbjct 188257 AGGTGAGTTTTTCCCAATCTTTAAGATC 188230 >seq114 Length=165420 Score = 163 bits (180), Expect = 6e-35 Identities = 182/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || |||||||| | ||| | || || | ||||||||||| Sbjct 153367 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATCT 153308 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || |||| || || ||||| || | ||| | || ||||||| Sbjct 153307 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 153248 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| |||| |||||| || ||| | ||||| ||||| | |||| Sbjct 153247 GGAATTCCTTCTTTGTCTTAAATTTTAGCCTTGACAGCATCTATAGTGTCTGATGGTTCT 153188 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546 || || ||||| ||||||||||||||||||||||||| ||| || | ||| | ||| | Sbjct 153187 ACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTACATAGTTTTAAAT 153128 Query 192547 AAA 192549 ||| Sbjct 153127 AAA 153125 Score = 143 bits (158), Expect = 5e-29 Identities = 189/260 (73%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 192294 TTTTAGTT-TAAT---AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTT 192349 ||||| || |||| ||| |||||||| | | || |||||||| | ||| | || | Sbjct 139753 TTTTAATTATAATTGAAATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCT 139694 Query 192350 TAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTA 192409 | | ||||||||||| || | ||||| | |||| || |||| || || ||||| || | Sbjct 139693 TTTAAATATTATAATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGA 139634 Query 192410 ATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTA 192469 ||| | || ||||||||| |||||||| ||||||| |||||| || ||| | Sbjct 139633 GTCTTTATTAATCAGGTGGGATTCCTTCCTTATCTTAAATTTTAGCCTTGACAGCGTCAA 139574 Query 192470 TAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATA 192529 | | ||||| | ||| || || ||||| || || || |||||||||||||||| ||| | Sbjct 139573 TGGTGTCTGATGGTTCAACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTAACAAAAA 139514 Query 192530 TCTGCATTTTATTAGAAAAA 192549 | ||||| || ||| | ||| Sbjct 139513 TTTGCATATTTTTAAATAAA 139494 Score = 141 bits (156), Expect = 2e-28 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || ||||| || | ||| | || || | || |||||||| Sbjct 141194 ATTCCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCT 141135 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || |||| || || ||||| || | ||| | || ||||||| Sbjct 141134 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 141075 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || |||| |||||| || ||| | |||| ||||| | ||| Sbjct 141074 GGAATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCATCAATAGTGTCTGATGGTTCA 141015 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546 || || ||||| || |||||||| ||||||||||||| ||| || ||||| || ||| | Sbjct 141014 ACATCAAGAGTGATTGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATATTTTTAAAT 140955 Query 192547 AAA 192549 ||| Sbjct 140954 AAA 140952 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || |||||||| | ||| | || || | || |||||||| Sbjct 163559 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCT 163618 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || |||| || || ||||| || | ||| | || ||||||| Sbjct 163619 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 163678 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || |||| |||||| || ||| |||| ||||| | ||| Sbjct 163679 GGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCA 163738 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||||||||| ||||||||||||| ||| || ||||| Sbjct 163739 ACATCAAGAGTGATGGTTTTACCGGTTAATGTTTTAACAAAAATTTGCAT 163788 Score = 136 bits (150), Expect = 8e-27 Identities = 173/237 (73%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| | | || |||||||| | ||| | || || | || |||||||| Sbjct 164280 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCT 164339 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||||| | |||| || |||| ||| || ||||| || | ||| | || ||||||| Sbjct 164340 GAAAGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 164399 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || |||| |||||| || ||| |||| ||||| | ||| Sbjct 164400 GGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCA 164459 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT-TATT 192542 || || ||||| || || || |||||||||||||| | |||||| | ||||| |||| Sbjct 164460 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTTCTATT 164516 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192306 AATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATC 192365 ||| |||||||| | | || |||||||| | ||| | || || | || |||||||| Sbjct 144115 AATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATC 144056 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||||| | |||| || |||| || || ||||| || | ||| | || |||| | Sbjct 144055 TGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAAG 143996 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| |||||||| || |||| ||||| | ||| |||| ||||| | ||| Sbjct 143995 TGGGATTCCTTCCTTGTCTTAAATTTTTGCCTCGACAGCTTCAATAGTGTCTGATGGTTC 143936 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 || || ||||| ||||||||||||||||||||||||| ||| || | ||||| Sbjct 143935 AACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTTCATTT 143883 Score = 131 bits (144), Expect = 3e-25 Identities = 170/234 (73%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| | | || ||||| || | ||| | || || | || |||||||| || Sbjct 165080 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 165139 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||||| | |||| || |||| ||| || ||||| || | ||| | || ||||||||| Sbjct 165140 AGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 165199 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 |||||||| || |||| |||||| || ||| |||| ||||| | ||| || Sbjct 165200 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 165259 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT-TATT 192542 || ||||| || || || |||||||||||||| | |||||| | ||||| |||| Sbjct 165260 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTTCTATT 165313 Score = 102 bits (112), Expect = 2e-16 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 |||||||| || || | ||| | |||| | ||||||| || ||||| || | ||| Sbjct 144750 ATATTATAGTCTGAGATTGTCCTATCATGTTATAATTGTTATCCTGCAAAAATGAGTCTT 144691 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 | || ||||||||| |||||||| || |||| |||||| || ||| | |||| Sbjct 144690 TATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAACCTTGACAGTGTCAATAGTG 144631 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATAT 192530 ||| | | ||| || ||||| |||||||| |||||||||||||| | |||||| Sbjct 144630 TCTAATGGTTCAACACAAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATAT 144575 Score = 93.3 bits (102), Expect = 8e-14 Identities = 133/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| | | |||| ||| || || |||| | |||||||| || | ||| Sbjct 149914 ATATTATAATCCAAAAGTGTTTTTTCTTCTTCTAATTAATGTCCAGCAAAAATGAGTCTT 149855 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT---ATA 192471 | || ||||| ||| |||||||| ||||||| | || || ||||| ||| | || Sbjct 149854 TATTAATCAGATGGGATTCCTTCCTTATCTTAAAGTTAATGTTTTA---TAGATTCAATT 149798 Query 192472 GAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATC 192531 | ||||| ||| || || || ||| || ||||| ||||| || || ||||||| || Sbjct 149797 GTATCTGTCGAATCAACATCAAGAAGGATAGTTTTTCCAGTCAAAGTCTTAATAATAATT 149738 Query 192532 TGCATT 192537 | |||| Sbjct 149737 TACATT 149732 Score = 93.3 bits (102), Expect = 8e-14 Identities = 133/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| | | |||| ||| || || |||| | |||||||| |||||||| Sbjct 163379 ATATTATAATCTAAAAGTGTTTTTTCTTCTTCTAATTATCGTCCAGCAAAAATTAATCTT 163438 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT---ATA 192471 | || | |||||| || ||||| ||||||| | || || ||||| ||| | || Sbjct 163439 TATTACTAAGGTGGAATCCCTTCCTTATCTTAAAGTTAATGTTTTA---TAGATTCAATT 163495 Query 192472 GAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATC 192531 | ||||| ||| || || || ||| || ||||| ||||| || || ||||||| || Sbjct 163496 GTATCTGTCGAATCAACATCAAGAAGGATAGTTTTTCCAGTCAAAGTCTTAATAATAATT 163555 Query 192532 TGCATT 192537 | |||| Sbjct 163556 TACATT 163561 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| | |||||| |||||| || |||| || |||||||| || ||| | Sbjct 153547 ATATTATAATCCAAAAATGTTTTTTCATCTTCTAATTAATTTCCAGCAAAAATCAATTTT 153488 Query 192415 TGTTGATC-AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 | || ||| ||| || || ||||| || ||| |||| || ||||| | || || | Sbjct 153487 TATT-ATCTAGGCGGAATCCCTTCCTTCTCTAAAATTTAATGTTTTAGAGAAGCAATTGT 153429 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||||| ||||| || || ||| | ||| | ||||| ||||| ||||| | || | Sbjct 153428 ATCTGTTGATTCAACATCAAGATGGAAAGTTCTTCCAGTCAATGTCTTAATGATAATTTA 153369 Query 192534 CATT 192537 |||| Sbjct 153368 CATT 153365 >seq128 Length=150569 Score = 152 bits (168), Expect = 1e-31 Identities = 182/247 (74%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 192296 TTAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGA 192355 || ||| ||| ||||||||| || | |||||||||||| | ||| | ||||| | | Sbjct 58076 TTGGTTCCATACCACCACCTCTTAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTAAA 58017 Query 192356 TATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCT 192415 |||||||||| || | |||| | |||| || | ||| || || ||||| || ||||| | Sbjct 58016 TATTATAATCTGAAAGAGTTCTTCCATCTTCGAGTTGCTTTCCTGCAAAAATCAATCTTT 57957 Query 192416 GTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAAT 192475 || ||||||||| |||||||||||||||| || ||| || ||| | || | || Sbjct 57956 ATTAATCAGGTGGAATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATTGTAT 57897 Query 192476 CTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCA 192535 |||| | ||||| || ||||| ||||| || || || | ||||||| ||| || | || Sbjct 57896 CTGAAGGCTCTACATCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACA 57837 Query 192536 TTTTATT 192542 | ||||| Sbjct 57836 TATTATT 57830 >seq112 Length=167324 Score = 129 bits (142), Expect = 1e-24 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| ||||| || | ||||||||||| | ||| | ||||| ||||||||||||| || Sbjct 45499 ACCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATATTATAATCTGA 45440 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| | |||| |||||||| || |||||||| |||||||| | || ||| || || Sbjct 45439 AAGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATCGGGAGG 45380 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||| || || | || || || ||| | |||| ||| || | || || Sbjct 45379 GATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGGCTCAAC 45320 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 || || || ||||| ||||| || | || |||| ||| || | ||| ||||| Sbjct 45319 ATCAAGTGTGATGGTCTTACCCGTAAGGGTCTTAACAAAAATTTACATATTATT 45266 >seq56 Length=265680 Score = 125 bits (138), Expect = 1e-23 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| ||||| | | ||||||||||| | ||| | ||||| | || |||||||| || Sbjct 113497 ACCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATAATCTGA 113438 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| | |||| || | ||| || || ||||| || ||||| | ||||||||| || Sbjct 113437 AAGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGAGG 113378 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 |||||||||||||||| || ||| || ||| | || | ||||| | |||||| Sbjct 113377 AATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGGTTCTAC 113318 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 || || || || || || || || || ||||||| ||| || | ||| |||| Sbjct 113317 ATCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACATAATATT 113264 >seq13 Length=521119 Score = 116 bits (128), Expect = 7e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| ||||| || | ||||||||||| | || | ||||| | || ||||||||||| Sbjct 46019 ACCTCCTCTGAGTCTCAATACTAAATGAAGTGTTGATTCTTTTTAAATGTTATAATCAGA 46078 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| | |||| || |||| || |||||||| |||||||| | || |||||| || Sbjct 46079 AAGAGTTCTTCCATCCTCTAATTACTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGG 46138 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 ||||||||||| |||| || || || ||| | || | ||| || | || || Sbjct 46139 GATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATGGTATCCGATGGCTCAAC 46198 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542 || || || ||||| || || || | || |||| ||| || | ||| ||||| Sbjct 46199 ATCAAGTGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAAATTTACATATTATT 46252 >seq260 Length=80851 Score = 93.3 bits (102), Expect = 8e-14 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||| ||||| | | ||| ||||| ||||| || | || || ||||||||||||| || Sbjct 28241 ACCTCCTCTCAATCTTAAAACTAAGTGTAATGTTGATTCCTTTTAGATATTATAATCTGA 28182 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| | |||| || |||| || || ||||| || | ||| | || ||||||||| Sbjct 28181 AAGCTTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 28122 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTT---TACATTAGTTATAGAATCTGACGATTC 192485 |||||||| |||| | |||| ||||| | ||| | | | ||||| || || Sbjct 28121 AATTCCTTCCTTATTCTAGATTTAGTTTTTAACTTCATCAATGGTGTGATCTG--GA-TC 28065 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| || || || || || | ||||||| ||| || | ||| Sbjct 28064 AACATCTAAAGTGATTGTCTTTCCTGTAAGGGTTTTAACAAAAATTTACAT 28014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984450408377100