Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq253 255 1e-62 seq128 170 3e-37 seq114 163 5e-35 seq56 140 6e-28 seq112 136 7e-27 seq507 125 1e-23 seq13 122 2e-22 seq16 95.1 2e-14 seq260 91.5 3e-13 seq454 87.8 3e-12 >seq253 Length=82967 Score = 255 bits (282), Expect = 1e-62 Identities = 520/777 (67%), Gaps = 24/777 (3%) Strand=Plus/Minus Query 38846 AACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAATTCATAAAATCAAA 38905 |||| || |||||||||| || ||||| |||| ||| ||||| | || ||| | ||||| Sbjct 29903 AACTCTTCTTTCGAAAAAATTAGTTTTACCTTGTAAAGATATCATATCCATCCATTCAAA 29844 Query 38906 TGGATTTTTGGTATTATAATATTTTT----CTCCTATCAATACATATAATAATCTATCGG 38961 ||||| || | ||||||| ||||| |||||| || || ||| ||||||||| | Sbjct 29843 AGGATTCTTTGAATTATAA-ATTTTAGGAGCTCCTA---ATGCAAATATTAATCTATCTG 29788 Query 38962 CCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAATTTAAATGGTA 39021 | |||||||||| ||||| | ||| | | | |||||||||| | ||||| | || || Sbjct 29787 CAACAAATTCAATATATTATTTCATCATATTAGAATTCATACCAATTAATTCTACTGATA 29728 Query 39022 ATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat--cat-aatta 39078 | || ||| ||||||||||||||| ||||| ||||| | |||||| ||| |||| Sbjct 29727 AAGCTTCACTAATAAATTCTTTTTCAATTTCAACAGCAGATGAAATTATTTCATGAATTC 29668 Query 39079 tattattttttgataatttatatttaatatgattcgcatataGTAAACATGCAAAATCCG 39138 | | ||| || ||||||| | | ||| || || |||| ||| || || || | Sbjct 29667 TTTAATTACTT---AATTTATTGATTAAATGTTTG---TAAAGTAGACAAGCGAAGTCTG 29614 Query 39139 TATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATC 39198 |||| | |||||| || || || || |||||||| ||| || | ||| ||||| ||| Sbjct 29613 TATGAAGACCTTCATCTCTTGAAATTAATTCATTTGAAAATGTGAGTCCAGGCATCAATG 29554 Query 39199 CTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACAC 39258 ||| ||||| | ||| || || | ||| || ||||||||||||||| || ||| Sbjct 29553 ATCTTTTTTTTATCCAGAAAATGGCACAAAATGAACCAGAAAAGAATATACCTTCAACAG 29494 Query 39259 ACGCAAATGCTATTATTCTTGCTCCAAACATTAAT--TTATCATCTAAAATCCAATTTAT 39316 | ||||| || |||| |||| | ||| || ||| ||||||| |||||| || || Sbjct 29493 AAGCAAAAGCAATTAATCTTTCAGCAA--ATGAATCATTATCAT---TAATCCATTTCAT 29439 Query 39317 GGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAATTCATN 39376 ||||| ||| || |||| ||| ||| | ||| || ||||| | || || | || Sbjct 29438 AGCCCACATTGCCTTCTTTTGTATAACAGGCACATTATCAATAGCATGAAGTAGATAATT 29379 Query 39377 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTTCAGAATGTAC 39436 ||||| |||| ||||| | Sbjct 29378 TTTTTCATTTTCATCAGTTATGTAAGTATCAATCAATAGTGAATAGGTTTCTGAATGAAT 29319 Query 39437 AGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATACTGAACTTCGGA 39496 | |||||||||| | |||| ||| || || ||||||| | | |||||| | Sbjct 29318 ATTCTCCATAGCTAACTAAAATCCATAGAAACATCTAGCTTCTGGAACTTAAACTTCTGT 29259 Query 39497 AAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAATGCTAA 39556 | | ||| || | | || || ||| |||||||||||| ||||| ||||| || | Sbjct 29258 ACAAAATTATTAAGCCAAGTTTTCATTCACAATACCATCACTAGCTGCAAAGAAGGCAAG 29199 Query 39557 AACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAAGATTCAAGATC 39613 ||||| ||||||||||| ||||||| | | ||||||||| || |||||| Sbjct 29198 TACATACTTAATAAAATGCTTTTCATCTGAGGTAAGTTTTTCCCAATCTTTAAGATC 29142 >seq128 Length=150569 Score = 170 bits (188), Expect = 3e-37 Identities = 189/252 (75%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 171829 TTAGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAA 171888 || ||| |||| ||||||||| |||| |||||||||||| | ||| | ||||| ||| Sbjct 58076 TTGGTTCCATACCACCACCTCTTAGTCTTAATACTAAATGGAGAGTTGATTCTTTTTAAA 58017 Query 171889 TATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCT 171948 ||||||||||||| | || || | | || || | ||| || || |||||||| ||||| | Sbjct 58016 TATTATAATCTGAAAGAGTTCTTCCATCTTCGAGTTGCTTTCCTGCAAAAATCAATCTTT 57957 Query 171949 GTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTAT 172008 || |||||||| |||||||||||||||| || ||| || ||| | || |||| Sbjct 57956 ATTAATCAGGTGGAATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATTGTAT 57897 Query 172009 CTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCA 172068 |||| | ||||| || ||||| ||||| || || || | ||||||| || || | || Sbjct 57896 CTGAAGGCTCTACATCAAGAGTGATGGTCTTTCCCGTCAGGGTTTTAACAAAAATTTACA 57837 Query 172069 TTTTATTATAAA 172080 | ||||| |||| Sbjct 57836 TATTATTTTAAA 57825 >seq114 Length=165420 Score = 163 bits (180), Expect = 5e-35 Identities = 182/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || |||||||| | ||| | || || |||||||||||||| Sbjct 153367 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATCT 153308 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| || || |||||||| | ||| | || |||||| Sbjct 153307 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 153248 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| |||| |||||| || ||| | |||||| ||||| | |||| Sbjct 153247 GGAATTCCTTCTTTGTCTTAAATTTTAGCCTTGACAGCATCTATAGTGTCTGATGGTTCT 153188 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAA 172079 || || ||||| ||||||||||||||||||||||||| || || | ||| | ||| | Sbjct 153187 ACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTACATAGTTTTAAAT 153128 Query 172080 AAA 172082 ||| Sbjct 153127 AAA 153125 Score = 143 bits (158), Expect = 5e-29 Identities = 178/244 (73%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 ||| |||||||| | || || |||||||| | ||| | || || ||||||||||||| Sbjct 139737 AATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATC 139678 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 ||| | | || | | || || |||| || || |||||||| | ||| | || ||||| Sbjct 139677 TGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGG 139618 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| |||||||| ||||||| |||||| || ||| || || ||||| | ||| Sbjct 139617 TGGGATTCCTTCCTTATCTTAAATTTTAGCCTTGACAGCGTCAATGGTGTCTGATGGTTC 139558 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATA 172078 || || ||||| || || || |||||||||||||||| || || ||||| || ||| | Sbjct 139557 AACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTAACAAAAATTTGCATATTTTTAAA 139498 Query 172079 AAAA 172082 ||| Sbjct 139497 TAAA 139494 Score = 141 bits (156), Expect = 2e-28 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || ||||| || | ||| | || || |||| ||||||||| Sbjct 141194 ATTCCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCT 141135 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| || || |||||||| | ||| | || |||||| Sbjct 141134 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 141075 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| || ||| | ||||| ||||| | ||| Sbjct 141074 GGAATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCATCAATAGTGTCTGATGGTTCA 141015 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTATAA 172079 || || ||||| || |||||||| ||||||||||||| || || ||||| || ||| | Sbjct 141014 ACATCAAGAGTGATTGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATATTTTTAAAT 140955 Query 172080 AAA 172082 ||| Sbjct 140954 AAA 140952 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || |||||||| | ||| | || || |||| ||||||||| Sbjct 163559 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCT 163618 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| || || |||||||| | ||| | || |||||| Sbjct 163619 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 163678 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| || ||| ||||| ||||| | ||| Sbjct 163679 GGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCA 163738 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||||||||| ||||||||||||| || || ||||| Sbjct 163739 ACATCAAGAGTGATGGTTTTACCGGTTAATGTTTTAACAAAAATTTGCAT 163788 Score = 138 bits (152), Expect = 2e-27 Identities = 178/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || |||||||| | ||| | || || |||| ||||||||| Sbjct 164280 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCT 164339 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| ||| || |||||||| | ||| | || |||||| Sbjct 164340 GAAAGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGT 164399 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| || ||| ||||| ||||| | ||| Sbjct 164400 GGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCA 164459 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT-TATTATA 172078 || || ||||| || || || |||||||||||||| | ||||| | ||||| |||| || Sbjct 164460 ACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTTCTATT-TA 164518 Query 172079 AAA 172081 ||| Sbjct 164519 AAA 164521 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 ||| |||||||| | || || |||||||| | ||| | || || |||| |||||||| Sbjct 144115 AATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATC 144056 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 ||| | | || | | || || |||| || || |||||||| | ||| | || ||| | Sbjct 144055 TGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAAG 143996 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| |||||||| || |||| ||||| | ||| ||||| ||||| | ||| Sbjct 143995 TGGGATTCCTTCCTTGTCTTAAATTTTTGCCTCGACAGCTTCAATAGTGTCTGATGGTTC 143936 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071 || || ||||| ||||||||||||||||||||||||| || || | ||||| Sbjct 143935 AACATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTTCATTT 143883 Score = 132 bits (146), Expect = 9e-26 Identities = 175/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || || ||||| || | ||| | || || |||| ||||||||||| Sbjct 165080 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 165139 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || |||| ||| || |||||||| | ||| | || |||||||| Sbjct 165140 AGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 165199 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| || ||| ||||| ||||| | ||| || Sbjct 165200 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 165259 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT-TATTATAAAA 172081 || ||||| || || || |||||||||||||| | ||||| | ||||| |||| ||||| Sbjct 165260 TCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTTCTATT-TAAAA 165318 Score = 111 bits (122), Expect = 3e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || || ||||| || | ||| | || || |||| ||||||||||| Sbjct 164056 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 164115 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || |||| || || |||||||| | ||| | || |||||||| Sbjct 164116 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 164175 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| || ||| ||||| ||||| | ||| | Sbjct 164176 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAGCA 164235 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| |||||||| ||||| || || ||| ||| || | |||| Sbjct 164236 TCAAGAGTGATGGTTTT-CCAGTCAAGGTCTTAGCGAAAATTTACATT 164282 Score = 98.7 bits (108), Expect = 2e-15 Identities = 134/186 (72%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 171886 AAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATC 171945 |||| ||||||||||||| | | ||| || || |||| || || ||||||| | || Sbjct 152968 AAATGTTATAATCTGATAGTGTTTTTTCATCTTCTAATTACTTTCCTACAAAAATGAGTC 152909 Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005 | | || |||||| | |||||||| || | || |||||| ||| ||| | |||| Sbjct 152908 TTTATTCATCAGGTAG-ATTCCTTCCTTGTTTTAAATTTTAACTTTGACAGCATCAATAG 152850 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCT 172065 | ||||| | ||| || || |||||||| |||||| | ||||||| | | ||||| | Sbjct 152849 TGTCTGATGGTTCAACATCAAGAGTAATAGTTTTAGTATATAATGTTCTTACAAATATTT 152790 Query 172066 GCATTT 172071 ||||| Sbjct 152789 ACATTT 152784 Score = 96.9 bits (106), Expect = 6e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 171886 AAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATC 171945 |||||||||| ||||| | | | || | | ||||||| || |||||||| | || Sbjct 144752 AAATATTATAGTCTGAGATTGTCCTATCATGTTATAATTGTTATCCTGCAAAAATGAGTC 144693 Query 171946 TCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAG 172005 | | || |||||||| |||||||| || |||| |||||| || ||| | |||| Sbjct 144692 TTTATTAATCAGGTGGGATTCCTTCCTTGTCTTAAATTTTAACCTTGACAGTGTCAATAG 144633 Query 172006 TATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 | ||| | | ||| || ||||| |||||||| |||||||||||||| | ||||| Sbjct 144632 TGTCTAATGGTTCAACACAAAGAGTGATGGTTTTTCCAGTTAATGTTTTTACAAATAT 144575 Score = 95.1 bits (104), Expect = 2e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || |||||||| | ||| | || | ||| ||||||||| Sbjct 144342 ATTCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTATACAATGTTATAATCT 144283 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| || || |||||||| | ||| | || | | || Sbjct 144282 GAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTCATAAAGT 144223 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| | ||||| | || | |||||| | | || ||||||| | |||| Sbjct 144222 GGGATTCCTTCCTCATCTTACAATTAACTTTTTATAAAATAAATTGTATCTGTCTATTCA 144163 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGA 172059 || || ||| | ||| | ||||| ||||| ||||||| Sbjct 144162 ACATCAAGATGGAAAGTTCTTCCAGTCAATGTCTTAATGA 144123 Score = 93.3 bits (102), Expect = 8e-14 Identities = 129/178 (72%), Gaps = 7/178 (4%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 |||||||||||| | | | | ||| || || |||| | ||||||||||||||||| Sbjct 163379 ATATTATAATCTAAAAGTGTTTTTTCTTCTTCTAATTATCGTCCAGCAAAAATTAATCTT 163438 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT---ATA 172004 | || | |||||| || ||||| ||||||| | || || ||||| ||| | || Sbjct 163439 TATTACTAAGGTGGAATCCCTTCCTTATCTTAAAGTTAATGTTTTA---TAGATTCAATT 163495 Query 172005 GTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 ||||||| ||| || || || ||| || ||||| ||||| || || ||||| |||| Sbjct 163496 GTATCTGTCGAATCAACATCAAGAAGGATAGTTTTTCCAGTCAAAGTCTTAAT-AATA 163552 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 171936 AAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACA 171995 ||||| | ||| | || |||| ||| |||||||| || |||| |||||| || ||| Sbjct 149638 AAAATGAGTCTTTATTAATCAG-TGGGATTCCTTCCTTGTCTTAAATTTTAGCCTTGACA 149580 Query 171996 TTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTA 172055 ||||| ||||| | ||| || || ||||| |||||||||||||| || || ||| Sbjct 149579 GCGTCAATAGTGTCTGATGGTTCAACATCAAGAGTGATGGTTTTACCAGTCAAGGTCTTA 149520 Query 172056 ATGAATATCTGCAT-TTTATTATAAAAA 172082 | ||| || ||||| ||| ||| | ||| Sbjct 149519 ACGAAAATTTGCATATTTTTTAAATAAA 149492 Score = 84.2 bits (92), Expect = 4e-11 Identities = 127/178 (71%), Gaps = 7/178 (4%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| | | | | ||| || || |||| | ||||||||||| | ||| Sbjct 149914 ATATTATAATCCAAAAGTGTTTTTTCTTCTTCTAATTAATGTCCAGCAAAAATGAGTCTT 149855 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTT---ATA 172004 | || |||| ||| |||||||| ||||||| | || || ||||| ||| | || Sbjct 149854 TATTAATCAGATGGGATTCCTTCCTTATCTTAAAGTTAATGTTTTA---TAGATTCAATT 149798 Query 172005 GTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATA 172062 ||||||| ||| || || || ||| || ||||| ||||| || || ||||| |||| Sbjct 149797 GTATCTGTCGAATCAACATCAAGAAGGATAGTTTTTCCAGTCAAAGTCTTAAT-AATA 149741 >seq56 Length=265680 Score = 140 bits (154), Expect = 6e-28 Identities = 178/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 171836 CATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATA 171895 |||| ||| ||||| | || ||||||||||| | ||| | ||||| |||| ||||| Sbjct 113503 CATACCACCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATA 113444 Query 171896 ATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTC 171955 |||||| | || || | | || || | ||| || || |||||||| ||||| | ||| || Sbjct 113443 ATCTGAAAGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATC 113384 Query 171956 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGA 172015 ||| || |||||||||||||||| || ||| || ||| | || || ||||| | Sbjct 113383 AGGAGGAATTCCTTCTTTATCTTAAATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGG 113324 Query 172016 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 |||||| || || || || || || || || || ||||||| || || | ||| |||| Sbjct 113323 TTCTACATCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACATAATATT 113264 Query 172076 ATAAA 172080 |||| Sbjct 113263 TTAAA 113259 >seq112 Length=167324 Score = 136 bits (150), Expect = 7e-27 Identities = 177/245 (72%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 171836 CATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATA 171895 |||| ||| ||||| |||| ||||||||||| | ||| | ||||| | |||||||| Sbjct 45505 CATACCACCTCCTCTGAGTCTCAATACTAAATGGAGAGTTGATTCTTTTTAGATATTATA 45446 Query 171896 ATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTC 171955 |||||| | || || | | || |||||||| || ||||||||||||||||| | || || Sbjct 45445 ATCTGAAAGAGTTCTTCCATCCTCCAATTGCTTTCCAGCAAAAATTAATCTTTATTAATC 45386 Query 171956 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGA 172015 || || |||||||| || || | || || || ||| | |||||||| || | Sbjct 45385 GGGAGGGATTCCTTCCTTGTCCTAGATCTTTGCCTTAACAGCATCGATAGTATCAGATGG 45326 Query 172016 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 || || || || || ||||| ||||| || | || |||| || || | ||| ||||| Sbjct 45325 CTCAACATCAAGTGTGATGGTCTTACCCGTAAGGGTCTTAACAAAAATTTACATATTATT 45266 Query 172076 ATAAA 172080 |||| Sbjct 45265 TTAAA 45261 >seq507 Length=36014 Score = 125 bits (138), Expect = 1e-23 Identities = 169/234 (72%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || || ||||| || | ||| | || || |||| ||||||||||| Sbjct 35714 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGAA 35655 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || |||| || || |||||||| | ||| | || |||||||| Sbjct 35654 AGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGG 35595 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| || ||| ||||| ||||| | ||| || Sbjct 35594 ATTCCTTCCTTGTCTTAAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACA 35535 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT-TATT 172075 || ||||| |||||||| ||||| || || |||| ||| || | ||||| |||| Sbjct 35534 TCAAGAGTGATGGTTTTTCCAGTCAAGGTCTTAACGAAAATTTACATTTCTATT 35481 >seq13 Length=521119 Score = 122 bits (134), Expect = 2e-22 Identities = 174/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 171836 CATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATA 171895 |||| ||| ||||| |||| ||||||||||| | || | ||||| |||| ||||| Sbjct 46013 CATACCACCTCCTCTGAGTCTCAATACTAAATGAAGTGTTGATTCTTTTTAAATGTTATA 46072 Query 171896 ATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTC 171955 ||| || | || || | | || || |||| || ||||||||||||||||| | || || Sbjct 46073 ATCAGAAAGAGTTCTTCCATCCTCTAATTACTTTCCAGCAAAAATTAATCTTTATTAATC 46132 Query 171956 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGA 172015 ||| || ||||||||||| |||| || || || ||| | || ||||| || | Sbjct 46133 AGGAGGGATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATGGTATCCGATGG 46192 Query 172016 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 || || || || || ||||| || || || | || |||| || || | ||| ||||| Sbjct 46193 CTCAACATCAAGTGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAAATTTACATATTATT 46252 Query 172076 ATAAA 172080 |||| Sbjct 46253 TTAAA 46257 >seq16 Length=469942 Score = 95.1 bits (104), Expect = 2e-14 Identities = 234/350 (67%), Gaps = 10/350 (3%) Strand=Plus/Minus Query 239437 GGATTATCAAAGGGATTACATGGATTTCATATACACGAATATGGAGATTTAAGCAATGGT 239496 ||| ||||| | ||||| |||||||||||||| || |||| ||| |||||| ||| || Sbjct 269569 GGACTATCAGATGGATTGCATGGATTTCATATTCATGAATTTGGTAATTTAATCAAAGGA 269510 Query 239497 TGCACATCAGCTGGTGAACATTATAATCCTTTTAATAGAATCCATGGTGATATTACTGAT 239556 || | ||| ||||| ||||| |||||| | || | | ||||| | | | ||| Sbjct 269509 TGTATATCTGCTGGACCTCATTACAATCCTCATGGTAAATTGCATGGGGGTCCAAAAGAT 269450 Query 239557 CCTATTAATAGGCATTTAGGAGATTTAGGAAATATAAATGCAGATGAAAATGGGATAGCA 239616 || || || ||| | || ||||| |||||| | || || || ||||| | || Sbjct 269449 --TAAGAA-AGACATGTTGGTGATTTGGGAAATGTTCATTCA---GAGAATGGAGTTGCT 269396 Query 239617 AATGTTAATTTTCAAGATAATATTATATCTTTATATGGTGATTATAATATACTTGGAAGG 239676 || |||| || ||| || | | ||| |||||| | | | || ||||||| Sbjct 269395 TATTTTAAATTAACTGATGATTTGGTGAAATTAAGTGGTGAATTAAGTGTAATTGGAAGA 269336 Query 239677 AGTCTTGTAGTTCATG--ATTCACCTGATGATCTAGGAAAAACTAATCATCCGTTAAGTA 239734 | | || ||||||| | | | |||||||| ||||||| | ||||||| || | Sbjct 269335 TCTATGGTTGTTCATGCAAATGA--AGATGATCTTGGAAAAAGTGATCATCCAGATAGCA 269278 Query 239735 AAACTACTGGTAATTCTGGCGGAAGATTAGCATGCGGTATTATTGGTATT 239784 | | ||||||||| | || | ||||| || || |||| |||||| Sbjct 269277 AGAGCACTGGTAATGCAGGTACTCGTTTAGCTTGTGGAGTTATAGGTATT 269228 >seq260 Length=80851 Score = 91.5 bits (100), Expect = 3e-13 Identities = 167/241 (69%), Gaps = 8/241 (3%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| ||||| | || ||| ||||| ||||| || | || || | |||||||||||||| Sbjct 28241 ACCTCCTCTCAATCTTAAAACTAAGTGTAATGTTGATTCCTTTTAGATATTATAATCTGA 28182 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || | | || || |||| || || |||||||| | ||| | || |||||||| Sbjct 28181 AAGCTTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 28122 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT---ATCTGACGATTC 172018 |||||||| |||| | |||| ||||| || | | || || ||||| || || Sbjct 28121 AATTCCTTCCTTATTCTAGATTTAGTTTTTAACTTCATCAATGGTGTGATCTG--GA-TC 28065 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT--TTTATTA 172076 || |||| ||| || || || || || | ||||||| || || | ||| ||| ||| Sbjct 28064 AACATCTAAAGTGATTGTCTTTCCTGTAAGGGTTTTAACAAAAATTTACATGATTTCTTA 28005 Query 172077 T 172077 | Sbjct 28004 T 28004 >seq454 Length=44262 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || | || ||||||||| Sbjct 41263 ATTCCTCCTCTCAATCTCAAAACTAAGTGAAGTGTTGATTCCTTTTAGATGTTATAATCT 41322 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || |||| ||| ||||| || || | ||| | || || ||| Sbjct 41323 GAAAGTGTTCTACCATCTTCTAATTATTTTCCAGCGAAGATAAGTCTTTATTAATCGGGT 41382 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| ||| | || || || || | ||| Sbjct 41383 GGGATTCCTTCCTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCAGATGGTTCA 41442 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || |||||||| ||||| || || | ||| || | || || | |||| Sbjct 41443 ACATCAAGAGTAATAGTTTTTCCTGTGAGTGTCTTGACAAAGATTTACATT 41493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905109456886800