Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021305.1 Length=76179 Score E Sequences producing significant alignments: (Bits) Value seq1023 196 2e-45 >seq1023 Length=4203 Score = 196 bits (216), Expect = 2e-45 Identities = 512/774 (66%), Gaps = 13/774 (2%) Strand=Plus/Minus Query 65727 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 65786 ||||| | ||| ||||||| || | | || || |||||||| || || || | Sbjct 3623 GTGGAAGCGATTTCCACCGGATCGCTGGGCCTTGATATTGCTCTGGGGATTGGCGGTTTG 3564 Query 65787 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 65846 ||| | || || | || ||||| || ||||| ||| || || || | || ||| Sbjct 3563 CCGCGCGGGCGTATCGTCGAAATTTATGGCCCGGAAAGCTCGGGCAAAACCACGCTGGCA 3504 Query 65847 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 65906 | |||||| | ||| | ||||| |||| ||| |||| || |||| | || || || Sbjct 3503 TTGCACGCGATTGCCGAGGCGCAAAAGGGCGGCGGCACGGCGGCCTTTGTGGATGCAGAA 3444 Query 65907 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 65966 || | || || || | || |||||| || || || || ||||||| || | || Sbjct 3443 CATGCGCTCGATCCGGTCTATGCCAAGAAACTGGGCGTCGATATCGACAATCTGATCGTC 3384 Query 65967 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66026 ||||| || || ||||||||||| || || ||||| || || || || Sbjct 3383 TCGCAGCCTGATACGGGCGAGCAGGCGCTCGAAATCGTCGATACGCTGGTGCGTTCCAAT 3324 Query 66027 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66086 | | | | | | || || ||||| |||||||| ||||||||||| ||||| |||| Sbjct 3323 GCGATTGACGTGCTGGTGGTCGACTCAGTGGCGGCGCTGGTGCCGCGTGCCGAAATCGAG 3264 Query 66087 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 66146 || || || || ||||| || |||||||| || || ||| | ||| ||||| ||||| Sbjct 3263 GGTGAGATGGGCGACAGCCATGTCGGCCTTCAGGCCCGCTTGATGAGCCAGGCGCTGCGC 3204 Query 66147 AAGCTCACTGGCACCATCTCCAGCAC---CAACACGCTGACGCTCTGGGTCAACCAGTTG 66203 ||||| || ||| | ||| | | | | || | ||| ||| |||| ||| || Sbjct 3203 AAGCTGACCGGCTCGATCAGCCGTTCGCGCTGCATGGTGA---TCTTCATCAATCAGGTG 3147 Query 66204 CGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCT 66263 ||| ||||||||| |||| |||||| || || || ||||||||||| || Sbjct 3146 CGCATGAAGATCGG---CGTGATGTACGGCAATCCTGAAACGACGACGGGCGGCAATGCG 3090 Query 66264 TTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGG 66322 | | |||||| || || || || | || | || |||| || | || ||||| | Sbjct 3089 CTCAAGTTCTATGCTTCGGTGCGTCTCGACATTCGCCGCA-CGGGCCAGATCAAGGATCG 3031 Query 66323 CGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCC 66382 ||| || || ||||| || || |||||||| || ||||||||| |||| ||||| Sbjct 3030 CGACGATATCGTGGGCAATGCGACTCGCGTGAAGGTGGTAAAGAACAAGGTGGCGCCGCC 2971 Query 66383 GCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAAC 66441 | | | ||| ||| | || |||| || || ||||| || | || | ||| Sbjct 2970 TTTCAAGCAGGTCGAATTCGACATCATGTATGGCGAAGGCATTTC-CAAGATCGGCGAGA 2912 Query 66442 TCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCA 66495 ||||||| |||| |||| | || | || |||||||||| || ||||||| Sbjct 2911 TCCTCGATCTGGGCGTGAAGGCCGGGATTGTCGAGAAGTCGGGTGCGTGGTTCA 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243641033646840