Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq101 203 1e-46 seq107 165 2e-35 seq341 161 3e-34 seq122 161 3e-34 seq180 156 1e-32 seq673 147 6e-30 seq15 105 2e-17 seq7 105 2e-17 seq97 98.7 3e-15 seq85 89.7 2e-12 >seq101 Length=178508 Score = 203 bits (224), Expect = 1e-46 Identities = 346/497 (70%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | |||| |||||| || | || || ||| ||||| ||| Sbjct 164808 CTATCAAATCTACCAGGTCTTGTTAGTGCTGGATCAAGTAATTCTTTTCTATTTGTAGCT 164867 Query 288910 GCCAATACAACAA---TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || || |||| || ||| || ||| |||||||||||| | ||| | | | Sbjct 164868 GCTAAAACAATAACATTAGTATCAGTTCC---AAATCCATCCATCTCTACTAATAACTAA 164924 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || ||||||||||| ||||| ||| | ||| |||||| Sbjct 164925 TTCAATGTATTATCTCTTTCATCATT---ACCTC--CAAT-TTTTGCATC---TCTTTTT 164975 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||||||||| |||||||| || | || ||||| ||| | | || | Sbjct 164976 CTACCAACAGCATCAATTTCATCAATGAATATTATACTTGGAGATTTTGCTTTTGCTTAT 165035 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | |||||| | |||||| ||||||| ||||| || ||| Sbjct 165036 TTAAATAAATCTCTAACTCTACTTGCTCCTACTCCAACAAACATTTCAACAAAATCTGAA 165095 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || || | |||| |||||| || || |||| | |||| | |||| Sbjct 165096 CCACTTACAAAAAAAAAGGGTACACCTGCTTCTCCAGCACATGCCTTTGCCACCATTGTC 165155 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| ||||| || ||||| |||||| |||| |||||| |||||| || | Sbjct 165156 TTACCAGTTCCTGGAGGTCCTGCTAATAATGCTCCTCTTGGTAATTTTGCACCCATTTCC 165215 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||||| ||| |||||||||| ||||||| ||||| | ||| |||| || ||| Sbjct 165216 TTATATTTACGAGGTTTCTTTAAAAAATCTACAAATTCCTTTATTTCTAATTTGGCTTCA 165275 Query 289327 TCACATCCTGCTACATC 289343 || |||| || ||||| Sbjct 165276 TCTAATCCAGCCACATC 165292 Score = 159 bits (176), Expect = 1e-33 Identities = 349/517 (68%), Gaps = 18/517 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 ||||| || ||||||| | |||||||| | |||||| ||| || | || ||||| Sbjct 50140 CTATCTAATCTACCAGGTCTTGTTAATGCAGAATCTAATTAATCAGCCATATTAGTTGCA 50199 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTT-AAATCCATCCATACTTGTTAAAAT--TTGA 288966 ||||| |||| || | || | | || |||||||||||| || || | |||| Sbjct 50200 GCCAAAACAATAACATTTT-GATCTGTAGCAAATCCATCCAT--TTCAACAAGTAATTGA 50256 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | || | ||| ||||||||| ||| |||| | ||| |||| Sbjct 50257 TTTAAAGTATTTTCAGATTCATCATT---ACCA----AATCTGGCTTATC-----TTTTC 50304 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||| ||||||||| || ||||| ||||| | | ||||| |||| | | || | Sbjct 50305 TTACCAATAGCATCAATCTCATCAATAAAAATAATAGACGGACTCTTTTATTTTGCCTAT 50364 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||| || ||||| || | ||| ||||| || ||| |||||||||||||||| ||| Sbjct 50365 TCAAACAAATCTCTAACCCTACTTGCACCAAGTCCTACAAACATTTCTACAAATTCTGAA 50424 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| | || |||| ||| |||||| || || |||| | || | | ||| Sbjct 50425 CCACTTACATAAAAAAATGGTACTCCTGCTTCTCCAGCACATGCCTTTGCTAACATTGTT 50484 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||||||||| || ||||| ||||| |||| | || | ||| || || | Sbjct 50485 TTACCTGTTCCTGGAGGTCCTGTTAATAATGCTCCTCTAGGAATTTTAGCACCCAATTAT 50544 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 ||| |||| | | | |||||||||| |||| ||| | || ||| |||| | ||| Sbjct 50545 TTAAATTTTTTACTATTTGTTAAAAATTCAACAAATTCTTTAATTTCTACTTTTACTTCA 50604 Query 289327 TCACATCCTGCTACATCAGCAAAAGTAATATTAATAT 289363 || ||||||||||||| | ||| ||| |||| || Sbjct 50605 TCTAATCCTGCTACATCTGTAAATTTAACTTTAACAT 50641 >seq107 Length=173307 Score = 165 bits (182), Expect = 2e-35 Identities = 338/498 (68%), Gaps = 17/498 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | ||| | |||||| || | || || ||| ||||||||| Sbjct 101080 CTATCAAATCTACCAGGTCTAGTGAGTGCTGGATCAAGTAGTTCTTTTCTATTTGTTGCT 101139 Query 288910 GCCAATAC---AACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || || || |||| ||| || ||| |||||||||||| ||| | || | Sbjct 101140 GCTAAGACTATAACATTAGTATCTGTTCC---AAATCCATCCATTTCAACTAATAATTAA 101196 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || |||||||||||| |||| || | || || ||| || || Sbjct 101197 TTCAATGTATTATCTCTTTCATCATTTCCACCTATTTTAGCA------TCTCTCTTTCTT 101250 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||| ||||||||||| || || || || | || ||||| ||| | | || | Sbjct 101251 ---CCAACTGCATCAATTTCATCTATAAATATAATACTAGGAGATTTTGCTTTAGCTTAT 101307 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | || |||| || ||| ||||||| ||||| || || Sbjct 101308 TTAAATAAATCTCTAACTCTACTAGCACCAACTCCTACAAACATTTCAACAAAATCTGAT 101367 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || ||||| ||| ||||| ||||| ||| | || | | ||| Sbjct 101368 CCACTTACAAAAAAGAATGGAACACCAGCTTCACCTGCACAAGCCTTTGCTACCATTGTT 101427 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||||||||| |||||||| | |||| | |||| |||||| ||| || || Sbjct 101428 TTACCTGTTCCTGGTGGTCCTGCCAATAAAGCTCCTCTTGGTAATTTAGCACCCATTTCT 101487 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT-GCCTC 289325 |||||||| || |||||| ||| ||||||| ||| | || ||| |||||| || || Sbjct 101488 TTATATTTTCTTGGTTTCTTTAGAAAATCTACAAATTCTTTAATTTC-TATTTTAGCTTC 101546 Query 289326 ATCACATCCTGCTACATC 289343 ||| |||| || ||||| Sbjct 101547 ATCTAATCCAGCCACATC 101564 Score = 120 bits (132), Expect = 9e-22 Identities = 335/502 (67%), Gaps = 19/502 (4%) Strand=Plus/Plus Query 288847 CTCCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTC-TGTTTGT 288905 || |||||||| || |||| | ||| |||||||| ||||| || ||| | || || Sbjct 11725 CTTCTATCAAATCTTCCAGGTCTAGTCAATGCTGGATCTAAAGAGTCT-CTCATATTAGT 11783 Query 288906 TGCTGCCAATACAACAATAGATTCGGTTTGCTT-AAATCCATCCATACTTGTTAAAATTT 288964 || || |||||||| | || | | | | | ||| |||||||| | ||||| || Sbjct 11784 GGCAGCTAATACAACTACAG-TACTATCAGTTCCAAAACCATCCATTTCTACTAAAAGTT 11842 Query 288965 GATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCC-GAATCGCTCCtt 289023 ||| | || | |||||||| |||||| ||| ||| | |||| | ||| Sbjct 11843 AATTTAAAGTATTATCCCTTTCCTCATTT-------TTGGATCCCTTTGAAT---TTCTT 11892 Query 289024 tttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCA 289083 ||||| ||||||||||||||||| ||||| || | | || |||| || | | || Sbjct 11893 TTTTTTCCAACAGCATCAATTTCATCAATAAAGACAATACTTGGAGCTTTGGATTTAGCT 11952 Query 289084 -ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 ||| ||| | ||| | || | | |||||| | ||||||||||||||| |||||||| Sbjct 11953 TATTTGAAA-AGTTCACGAACTCTTGCTGCTCCTAAACCAACATACATTTCAACAAATTC 12011 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 || | || | || ||| | || |||||| ||||| ||| | || | | Sbjct 12012 TGATCCACTAACATAAAAGAAAGGGACTCCTGCTTCACCTGCACAAGCCTTTGCTAATAA 12071 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262 || || || |||||||| ||||| ||||| |||| |||| | | | || || Sbjct 12072 AGTTTTTCCAGTTCCAGGAGGTCCTGTTAATAATGCTCCTCTTGGAATTCTAGCTCCTAA 12131 Query 289263 AGACTTATATTTCTCAGG-GCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 |||||||| | || ||| ||||| || ||||||| ||| | ||| ||||| Sbjct 12132 TTTTTTATATTTTTTTGGTGCT-TTTAAGAAATCTACAAATTCTCTTATTTCTCCTTTTG 12190 Query 289322 CCTCATCACATCCTGCTACATC 289343 | ||||| | ||||| ||||| Sbjct 12191 CTTCATCTTAACCTGCAACATC 12212 >seq341 Length=62811 Score = 161 bits (178), Expect = 3e-34 Identities = 337/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| | ||||| | || | ||||| || | || || ||| ||||| ||| Sbjct 56131 CTATCAAATCGACCAGGTCTTGTAAGAGCTGGATCAAGTAATTCTTTTCTATTTGTAGCT 56072 Query 288910 GCCAATACAACAA---TAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || || |||| || ||| |||||| |||||||||||| | ||| | | | Sbjct 56071 GCTAAAACAATAACATTAGCATCGGTTCC---AAATCCATCCATCTCTACTAATAACTAA 56015 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || ||||||||||| ||||| ||| | ||| |||||| Sbjct 56014 TTTAATGTATTATCTCTTTCATCATT---ACCTC--CAAT-TTTTGCATC---TCTTTTT 55964 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||||||||| ||||| || || | || ||||| ||| | | || | Sbjct 55963 CTACCAACAGCATCAATTTCATCAATAAATATTATACTTGGAGATTTTGCTTTTGCTTAT 55904 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | |||||| | |||||| ||||||| ||||| || ||| Sbjct 55903 TTAAATAAATCTCTAACTCTACTTGCTCCTACTCCAACAAACATTTCAACAAAATCTGAA 55844 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || |||| || ||| || || || |||| | |||| | |||| Sbjct 55843 CCACTTACAAAAAAAAATGGAACTCCTGCCTCTCCAGCACATGCCTTTGCCACCATTGTC 55784 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| || || || ||||| |||| | |||| | |||| |||||| || Sbjct 55783 TTACCAGTACCTGGAGGTCCTGTCAATAAAGCTCCTCTAGGTAATTTTGCTCCCATTTCT 55724 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||||| ||| |||||||||| || |||| ||||| | ||| ||||||| ||| Sbjct 55723 TTATATTTACGAGGTTTCTTTAAAAAATCAACAAATTCCTTTATTTCCAATTTTGCTTCA 55664 Query 289327 TCACATCCTGCTACATC 289343 || |||| || ||||| Sbjct 55663 TCTAATCCAGCAACATC 55647 >seq122 Length=159040 Score = 161 bits (178), Expect = 3e-34 Identities = 294/424 (69%), Gaps = 25/424 (6%) Strand=Plus/Minus Query 288901 TTTGTTGCTGCCAAT-ACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAA 288959 || ||||| ||||| |||| | | ||| ||| |||||||||||||| |||||| Sbjct 137344 TTAGTTGCC-CCAATCACAATTACACTTTCACTTTATTTAAATCCATCCATTTCTGTTAA 137286 Query 288960 AATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCT 289019 ||||| ||||| ||| ||| | ||| || || ||| || ||| Sbjct 137285 AATTTAATTAATTGT------------ATCTCTAGAATATCCTGGATCTT----AT-GCT 137243 Query 289020 CCtttttttACC---AACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTG 289076 | || || |||| || | ||| ||||| || || || || | | |||| |||| Sbjct 137242 C-TTCTTCTACCTCCAATACTATCTATTTCATCTATAAATATTATTGAAGGAGCCTTTTA 137184 Query 289077 TCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTAC 289136 ||| ||| | ||| | |||||| ||||| |||||||| | || ||| ||||||| | Sbjct 137183 TCTTGCAGCTTTAAAGATTTCTCTAACACGTGATGCTCCTACTCCTACAAACATTTCATC 137124 Query 289137 AAATTCAGAAGCGGATACTTGAATGAATGTTACATT-TGCTTCGCCTGCTACTGCCCTCG 289195 |||||| || | ||| | || |||| |||| |||||| ||||| | ||| || | Sbjct 137123 AAATTCTGATCCAGATTTATAAAAAAATGC-ACATCCTGCTTCTCCTGCCAATGCTCTTG 137065 Query 289196 CCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTG 289255 ||| |||||| ||||||||||| || || || |||||| || ||| ||||||| ||||| Sbjct 137064 CCAAAAGTGTTTTACCTGTTCCTGGAGGACCTACTAATAAAATTCCTTTTGGTAATTTTG 137005 Query 289256 CCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCAT 289315 | || | | ||||||||| || |||||||||||||||||||| || | ||| | Sbjct 137004 CACCTGAATCTGTATATTTCTTTGGATGTTTTAAAAATTCTACAATTTCTTCTAATTCTT 136945 Query 289316 ATTT 289319 ||| Sbjct 136944 CTTT 136941 >seq180 Length=112429 Score = 156 bits (172), Expect = 1e-32 Identities = 336/498 (67%), Gaps = 17/498 (3%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||||| | ||| | |||||| || | || || ||| ||||||||| Sbjct 43695 CTATCAAATCTACCAGGTCTAGTGAGTGCTGGATCAAGTAGTTCTTTTCTATTTGTTGCT 43636 Query 288910 GCCAATAC---AACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGA 288966 || || || |||| ||| || ||| |||||||||||| ||| | || | Sbjct 43635 GCTAAGACTATAACATTAGTATCTGTTCC---AAATCCATCCATTTCAACTAATAATTAA 43579 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 || | ||| | || |||||||||||| |||| || | || || ||| || || Sbjct 43578 TTCAATGTATTATCTCTTTCATCATTTCCACCTATTTTAGCA------TCTCTCTTTCTT 43525 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||| ||||||||||| || || || || | || ||||| ||| | | || | Sbjct 43524 ---CCAACTGCATCAATTTCATCTATAAATATAATACTAGGAGACTTTGCTTTAGCTTAT 43468 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 |||||| ||||| || | || |||| || ||| ||||||| ||||| || || Sbjct 43467 TTAAATAAATCTCTAACTCTACTAGCACCAACTCCGACAAACATTTCAACAAAATCTGAT 43408 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | ||| || ||||| ||| ||||| ||||| ||| | || | | ||| Sbjct 43407 CCACTTACAAAAAAGAATGGAACACCAGCTTCACCTGCACAAGCCTTTGCTACCATTGTT 43348 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| ||||| |||||||| |||| | |||| |||||| ||| || || Sbjct 43347 TTACCAGTTCCTGGTGGTCCTGTCAATAAAGCTCCTCTTGGTAATTTAGCACCCATTTCT 43288 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT-GCCTC 289325 |||||||| || |||||| ||| ||||||| ||| | || ||| |||||| || || Sbjct 43287 TTATATTTTCTTGGTTTCTTTAGAAAATCTACAAATTCTTTAATTTC-TATTTTAGCTTC 43229 Query 289326 ATCACATCCTGCTACATC 289343 ||| |||| || ||||| Sbjct 43228 ATCCAATCCAGCCACATC 43211 >seq673 Length=20555 Score = 147 bits (162), Expect = 6e-30 Identities = 325/475 (68%), Gaps = 13/475 (3%) Strand=Plus/Minus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAA---TAGATTCG 288930 |||||| ||||| ||||| |||||||| ||||| |||| ||||| || | | || Sbjct 12746 AATGCTTTATCTAAAATATCAGCTCTGTTAGTTGCCGCCATTACAATAACGTTGGTATCT 12687 Query 288931 GTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCA 288990 ||| | ||| || ||||| ||| | | ||| || || || | ||| || || ||| Sbjct 12686 GTT--CCGAAA-CCGTCCATTTCTGTAAGCAATTGGTTCAGCGTATTTTCTCTCTCGTCA 12630 Query 288991 TTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCA 289050 ||| |||| | |||| || || ||| | | |||||| ||||||||||||||| Sbjct 12629 TTTCCACCTTGT-AATCCGCCTCTTC-CTC-TAGCTCTACCAATCGCATCAATTTCGTCA 12573 Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGAT 289110 ||||| || | ||||| ||| | | || |||||||| |||||||| | || Sbjct 12572 ATGAAGATAATGGCTGGAGATTTTGCTTTAGCTTGAGCAAATAAATCTCTTACTCTAGAA 12513 Query 289111 GCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATA-CTTGAATGAATGTTAC 289169 || |||| || ||| |||||||||| || || ||| | || | | ||| ||| | || Sbjct 12512 GCACCAACTCCTACAAACATTTCTACGAAATCTGAACCAGAAAGCGAGAA-GAAAGGAAC 12454 Query 289170 ATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTC 289229 |||||||| || ||||| || | |||| | || ||||| ||||| || || || | Sbjct 12453 TTTTGCTTCACCAGCTACAGCTTTTGCCAATAAAGTTTTACCCGTTCCTGGAGGACCAAC 12394 Query 289230 TAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT-TATATTTCTCAGGGCTCTTTA 289288 ||| ||||| || || |||| |||| || | | | ||||||| || | | | || | Sbjct 12393 TAAGAGAACACCTTTCGGTA-TTTTACCTCCTAATTTTGTATATTTTTCTGAGTTTTTCA 12335 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | || ||||| | ||| | | ||| | ||| || | || ||||||||||| Sbjct 12334 AGAAATCTACTACTTCTTGCACTTCTTCTTTAGCACCTTCTAGACCTGCTACATC 12280 >seq15 Length=494447 Score = 105 bits (116), Expect = 2e-17 Identities = 241/362 (67%), Gaps = 8/362 (2%) Strand=Plus/Minus Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047 |||||||||| ||||| | | |||||| | | | |||| || || || || | ||||| Sbjct 63149 AACCAGTACCTATACCTTCAGCTCCATTAACTAAACTCATAGGAATGATAGGAACATAAT 63090 Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107 | |||| ||||| | | |||||||||| | | || |||| | | || || || Sbjct 63089 ATTCTGGTTCAACCATTTATCCATCATCTTCTTAATACTTTAATAAATGATCATCTTATT 63030 Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTG 60167 | || |||||| || ||||| || || ||| ||||||| || | ||||| Sbjct 63029 CAGGGAATATATACCTTGTAATTTTATTTAGAGCTGTAGAAATATATCTTGCAGATGCAT 62970 Query 60168 CGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGT 60227 ||||||||||||||| | | ||||| | || ||||| |||| |||||| | Sbjct 62969 GATCCTTGCCACCCATAGCTCTACTACCAAACTAACCTTTTGGTAATAATAAATTAATAT 62910 Query 60228 TGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAG----CACCATTTAAACTGGCT 60283 | ||||| || || ||||||| ||| | || | ||| | |||| | | | Sbjct 62909 TATTAGAACCAACAAAATTTTAAGCCATCCCTATAATCGTAGATACCAATGATA----TA 62854 Query 60284 TCACCGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAATT 60343 || || |||||||| |||| ||||| | | ||| || | |||| | ||||||||| Sbjct 62853 TCTCCATGATGATAAGCAGAGTGTTCAGCTATATAACCCCCCAATTAGACTACTTTAATT 62794 Query 60344 TC 60345 || Sbjct 62793 TC 62792 >seq7 Length=634827 Score = 105 bits (116), Expect = 2e-17 Identities = 244/363 (67%), Gaps = 10/363 (3%) Strand=Plus/Minus Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047 |||||||||| ||||| | | |||||| | | | |||| || || || || | ||||| Sbjct 36957 AACCAGTACCTATACCTTCAGCTCCATTAACCAAACTCATAGGAATGATAGGAACATAAT 36898 Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107 | |||| ||||| | | |||||||||| | || |||| | | || || | Sbjct 36897 ATTCTGGTTCAACCATTTATCCATCATCTTCCTAATACTTTAATAAATGATCATCCTGCT 36838 Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTG-TGTGAAAATATACCTCTCGGATGCT 60166 | || |||||| || |||||| || ||| | ||| | ||||| || | ||||| Sbjct 36837 CAGGGAATATATACCTAGTAATTTTAT-TAAGAGCTGTAGATATATATCTTGCAGATGCA 36779 Query 60167 GCGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATG 60226 ||||| ||||||||| | | ||||| | || ||||| |||| |||||| Sbjct 36778 TGATCCTTACCACCCATAGCTCTACTACCAAACTAACCTTTTGGTAATAATAAATTAATA 36719 Query 60227 TTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCA----CCATTTAAACTGGC 60282 || ||||| || || ||||||| ||| | || | ||| | | ||| | | | || | Sbjct 36718 TTATTAGAACCAACAAAATTTTAAGCCATCCCTATAATTGTAGAAACCAATGATA-TGTC 36660 Query 60283 TTCACCGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAAT 60342 | || |||||||| |||||||||| | | ||| |||| |||| | |||||||| Sbjct 36659 TCCA---TGATGATAAGCAGAATGTTCAGCTATATAACCACCCAATTAAACTACTTTAAT 36603 Query 60343 TTC 60345 ||| Sbjct 36602 TTC 36600 >seq97 Length=182329 Score = 98.7 bits (108), Expect = 3e-15 Identities = 249/379 (66%), Gaps = 0/379 (0%) Strand=Plus/Minus Query 59988 AACCAGTACCAATACCCTTTGTTCCATTGATAAGAATCATCGGGATAATTGGGATATAAT 60047 |||| ||||||||||| | | |||||| | | | |||| || || || || | ||| | Sbjct 164993 AACCTGTACCAATACCTTCAGCTCCATTTACTAAACTCATTGGAATTATAGGAACATAGT 164934 Query 60048 AAACTGGCTCAACACTATCACCATCATCTTTTAAGTATGTTAAAACCTTGTCGTCAATTT 60107 | | || ||||| | || |||||||| | || || ||| || | || || || Sbjct 164933 ATTCAGGTTCAACCATTTCTCCATCATCCTCTATATAATTTACTACGTGATCATCTTATT 164874 Query 60108 CGGGAAATATAGCCCGAGTAATCTTGGATAATTGTGTGAAAATATACCTCTCGGATGCTG 60167 | || || ||| | ||||| || ||| || ||||||| || | || || Sbjct 164873 CTGGGAAAATATATCTTGTAATTTTATTTAAGACAGTTGAAATATATCTTGCAGAAGCAT 164814 Query 60168 CGTCCTTGCCACCCATAAGACGGGTTCCAAATTGTCCGTTTGGCTGGAATAGATTAATGT 60227 ||||| || |||||| | | |||||||| || ||||| || ||||| || | Sbjct 164813 GATCCTTACCTCCCATAGCTCTACTACCAAATTGACCTCTTGGCAATAAAAGATTTATAT 164754 Query 60228 TGTTAGAGCCTACGAAATTTTGAGCGAGACCAACAATAGCACCATTTAAACTGGCTTCAC 60287 |||| || || || || |||| || | || | ||||| | ||| |||| Sbjct 164753 TGTTTGAACCAACAAAGTTTTATGCCATCCCTATAATAGTAGTTACCAAAGATATATCAC 164694 Query 60288 CGTGATGATATCCAGAATGTTCTGAAACATATCCACTGAATTGTGCGACTTTAATTTCGG 60347 | ||||||||| | |||||||||| | |||||| | |||| | ||||||||||| Sbjct 164693 CATGATGATATGCTGAATGTTCTGCGATATATCCTCCCAATTAAACAACTTTAATTTCTT 164634 Query 60348 AGTGGAGTTTTTTCTTGAA 60366 | | || ||| ||||||| Sbjct 164633 ATTTTAGATTTCTCTTGAA 164615 >seq85 Length=202968 Score = 89.7 bits (98), Expect = 2e-12 Identities = 136/191 (71%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 233259 TTAAAAATGTTGTAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCA 233318 |||| || ||| ||||| | ||| | | |||||| | ||||||||| ||||||||| Sbjct 63752 TTAATAAATTTGATGCACCATAAGCTAAAAAACAATCTCTTTCCATTTCTCCAATACGCT 63811 Query 233319 GACCACCATCATTTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTC--TTGGACC 233376 |||||||| || | || || | || | || |||||||| ||| ||||||| Sbjct 63812 ATCCACCATCTTTGGCTCTTCCTTCAACAGGTTAACGAGTTAGTTT--TTCCATTGGACC 63869 Query 233377 CTGAGCACGATAATTAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAACACGG 233436 | ||| | || |||||||||| ||||||||||||| ||||| |||| || || Sbjct 63870 TTTAGCTCTGGCATGAATTTTATCTATAACCATATGCTTAAGTCTTTAATAAAAAATAGG 63929 Query 233437 ACC--AATAAA 233445 ||| |||||| Sbjct 63930 ACCTTAATAAA 63940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471773359922602