Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021796.1 Length=72534 Score E Sequences producing significant alignments: (Bits) Value seq591 95.1 6e-15 >seq591 Length=27302 Score = 95.1 bits (104), Expect = 6e-15 Identities = 125/168 (74%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 2559 TTGCTAAAGCAACTCCTCCACCTGAAACAATTCCTTCTTCTAGGGCAGACCTTGTAGCAT 2618 || |||||||||| || ||||||| ||||||||||||||||| |||| || || || | Sbjct 22682 TTACTAAAGCAACACCACCACCTGCAACAATTCCTTCTTCTACAGCAGCTCTAGTTGCGT 22623 Query 2619 TAATACTATCCTCTACTCTATCTTGCTTCTCCTTCAACTC-ACTATCGGACTTTGCCCCT 2677 || ||| || ||||| |||| ||||| |||| || ||| || || || ||| Sbjct 22622 GAAGCGCATCATCAACTCTGTCTTTTTTCTCTTTCATTTCTACT-TCAGAAGCAGCACCT 22564 Query 2678 ACATA-AATAGTAGCTACGCCTCCTGTTATTCTAGATAACCTTTCTTG 2724 ||||| |||| ||| || ||||| | || | ||| ||| |||||||| Sbjct 22563 ACATACAATA-CAGCAACACCTCCAGCTAATTTAGCTAATCTTTCTTG 22517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231977367142470