Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq789 82.4 7e-11 >seq789 Length=11534 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 89895 AATATTTATGGCCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTC 89954 ||||||| ||||||||| ||||||||||||||| |||| ||||||||| || | ||| Sbjct 11249 AATATTT--GGCCTTGTAACTCAGTTGGTTAGAGTAGCTGACTCATAATCAGCAAGTCCT 11306 Query 89955 AGGTTCGAGTCCTGACTAGGCCACAACAT 89983 |||||||| || || |||||||| || Sbjct 11307 TGGTTCGAGCCCAAGCTGGGCCACAAAAT 11335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464955964766480