Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq527 89.7 9e-14 >seq527 Length=33895 Score = 89.7 bits (98), Expect = 9e-14 Identities = 155/223 (70%), Gaps = 7/223 (3%) Strand=Plus/Plus Query 26448 GGAAATAGAGAGCAGGAAATT--AGCGGTATATCAAGAAGGTTAAAAATGTTAGCTAAAG 26505 ||||| |||||||| |||||| | || | | || | |||||| | | || |||| Sbjct 19975 GGAAACAGAGAGCAAGAAATTGCAACGATTTCTCGTTCA--TTAAAAGCGATTGCAAAAG 20032 Query 26506 AACTGCAGGTGCCTATAATTGCTTTATGTCAATTATCTAGGGCTGTAGAAACTCGTGGTG 26565 || | | || ||| | ||||| | | ||||||||| || | |||||||| ||| Sbjct 20033 AATTAAACGTTCCTGTTATTGCACTTTCTCAATTATCCAGAACCGTAGAAACCCGTCCAA 20092 Query 26566 GTTCTAAACGTCCTTTGTTATCAGATTTGCGTGAATCAGGTGCAATAGAGCAGGATGCAG 26625 | || | ||| | || |||||| | ||||| || ||||| ||||| ||||||| Sbjct 20093 AT---AAGAGACCTCAACTTTCGGATTTGAGAGAATCTGGAGCAATTGAGCAAGATGCAG 20149 Query 26626 ATATAGTAGAGTTTATTTATAGACCAGATTATTATAAAATAGA 26668 |||| || || || || |||||||| ||||||||||| || Sbjct 20150 ATATCGTTTCTTTCATCTACAGACCAGAATATTATAAAATTGA 20192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91907839491144