Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021806.1 Length=100418 Score E Sequences producing significant alignments: (Bits) Value seq591 127 1e-24 >seq591 Length=27302 Score = 127 bits (140), Expect = 1e-24 Identities = 199/285 (70%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 96132 TTTAAAGCCTTCTTCTAGAATTTTCTGAGCTAATACTGTAGCTGTGGTTGTTCCATCTCC 96191 ||||| |||||| || || ||||||||| |||||||| || || ||||| || || Sbjct 21733 TTTAAGACCTTCTCTTACGATAGCCTGAGCTAAAACTGTAGCGGTAGTAGTTCCGTCACC 21674 Query 96192 TACTTCTGTATTAGTATTCTCAGCTACTTGTTTAATCATTTGAGCACCTAAGTTTTCAAA 96251 | ||| || || ||| |||| ||| | |||||||||||| | |||||| | Sbjct 21673 AGCAATATCATTGGTTTTAGAAGCAACTTCTTTCACCATTTGAGCACCCATGTTTTCTAC 21614 Query 96252 TGGATCTTCTAAATGAATTTCTCTAGCCACACTTACACCATCTTTAGTAATGATTGGATT 96311 | ||||||| | ||||||| | || ||| ||||| |||||||| | | ||| Sbjct 21613 TTTGTCTTCTAGCTCAATTTCTTTTGCTACAGAAACACCGTCTTTAGTTACGTGAGGAGC 21554 Query 96312 ATACTGGTCTAAACCTAGTATAACATTCTTACCTGATGGTCCTAGAGTTACTTTAACTGC 96371 | || | | | || || ||||| |||||||| ||||||||| ||||| Sbjct 21553 ACCGAAAGCTTTTTCAATCACTACGTTTCTACCTTTTGGTCCTAAAGTTACTTTTACTGC 21494 Query 96372 ATTAGCTAAAGCATCTACACCTCTCTTTAAGGCTTCTCTTGATTC 96416 ||| ||||| ||||| |||||||| |||| || ||||||||||| Sbjct 21493 ATTTGCTAATGCATCAACACCTCTTTTTAGAGCGTCTCTTGATTC 21449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 321203615923774