Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_021867.1 Length=46978 Score E Sequences producing significant alignments: (Bits) Value seq854 114 4e-21 >seq854 Length=7887 Score = 114 bits (126), Expect = 4e-21 Identities = 206/301 (68%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 39897 CACAATACATCTGTAAAATAAAATTCTGCGTAAGCTATTTGCCATAACAGAAAATTACTA 39956 || |||| |||| ||| | ||||||||||| || |||||||| | | |||||||| Sbjct 6511 CAAAATATATCTAAAAATTGTAATTCTGCGTAGGCAATTTGCCAAAGTAAGAAATTACTG 6570 Query 39957 ATGCGGTGTTCGCCACTTGTTCTTATTACTAAATCTACATCAGGTAGATTATGCGTGTAA 40016 || | ||| || || ||||| |||| ||||||||| ||||| || | || ||| Sbjct 6571 ATTCTCACTTCTCCGCTGGTTCTGATTAATAAATCTACTGGAGGTAAATCTTTAGTATAA 6630 Query 40017 AGATGCTTATTTAATATTGAATCGTCAATAGAATCTATTGAAATTATATTATTTTTAACT 40076 ||||| || | |||| || ||||| ||| ||| | |||||| | | ||| ||| Sbjct 6631 AGATGATTTTCGAATAGTGTTTCGTCTATATCTTCTGTAGAAATTTTTCCTTCTTTTACT 6690 Query 40077 TTATCACTAATTATTTTAACAGCATTTATGATTTCTTCTCTCGATCCGTAGCTTAATGCT 40136 | | |||| ||| || || |||| |||||| | ||| || |||||||||||| Sbjct 6691 TCTTGGGCAATTTCTTTTACTGCGTTTAGAATTTCTCTTTGCGAACCATAGCTTAATGCT 6750 Query 40137 AAGGTAAGGGTCATTCTGGTATTGTTTTTTGTTTGCGCTATTACTTCGAGCAATTCTTTT 40196 || | | || | ||||| ||||| || | ||| ||| | |||||||| || | Sbjct 6751 AAAACCAAATTACTTTTAGTATTATTTTTAGTAAGATCTACTACATTGAGCAATTGTTCT 6810 Query 40197 T 40197 | Sbjct 6811 T 6811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150203815392880