Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq1023 199 2e-46 >seq1023 Length=4203 Score = 199 bits (220), Expect = 2e-46 Identities = 513/774 (66%), Gaps = 13/774 (2%) Strand=Plus/Minus Query 67559 GTGGACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTAT 67618 ||||| | ||| ||||||| ||| | | || || ||||| || || || || | Sbjct 3623 GTGGAAGCGATTTCCACCGGATCGCTGGGCCTTGATATTGCTCTGGGGATTGGCGGTTTG 3564 Query 67619 CCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGC 67678 ||| | || || | || || || || || || || || || || | ||| || Sbjct 3563 CCGCGCGGGCGTATCGTCGAAATTTATGGCCCGGAAAGCTCGGGCAAAACCACGCTGGCA 3504 Query 67679 CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAA 67738 | |||||| | ||| | || || |||| ||| |||| || |||| | || || ||| Sbjct 3503 TTGCACGCGATTGCCGAGGCGCAAAAGGGCGGCGGCACGGCGGCCTTTGTGGATGCAGAA 3444 Query 67739 CATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTT 67798 ||| | ||||| || | || ||| | || || || ||| |||||||||| | || Sbjct 3443 CATGCGCTCGATCCGGTCTATGCCAAGAAACTGGGCGTCGATATCGACAATCTGATCGTC 3384 Query 67799 GTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGC 67858 |||||| || || ||||||||||| || || ||||| || || || || Sbjct 3383 TCGCAGCCTGATACGGGCGAGCAGGCGCTCGAAATCGTCGATACGCTGGTGCGTTCCAAT 3324 Query 67859 GAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAA 67918 | | || | | | || || ||||| |||||||| ||||||||||| || || |||| Sbjct 3323 GCGATTGACGTGCTGGTGGTCGACTCAGTGGCGGCGCTGGTGCCGCGTGCCGAAATCGAG 3264 Query 67919 GGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGC 67978 || || || || ||| || |||||||| || |||||| ||||| ||||| ||||| Sbjct 3263 GGTGAGATGGGCGACAGCCATGTCGGCCTTCAGGCCCGCTTGATGAGCCAGGCGCTGCGC 3204 Query 67979 AAGCTGACCGGCACGATTGCCAGCACCAACACGCT-CACCCTG---TGGGTGAATCAGCT 68034 |||||||||||| |||| |||| | | |||| || || | | |||||| | Sbjct 3203 AAGCTGACCGGCTCGAT---CAGC-CGTTCGCGCTGCATGGTGATCTTCATCAATCAGGT 3148 Query 68035 GCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGC 68094 |||| ||||||||| |||| |||||| ||| || || || || || || || Sbjct 3147 GCGCATGAAGATCGG---CGTGATGTACGGCAATCCTGAAACGACGACGGGCGGCAATGC 3091 Query 68095 TCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGA-GAAGGAAG 68153 || ||||| || ||||||||| | || | ||| | | || | || ||||| Sbjct 3090 GCTCAAGTTCTATGCTTCGGTGCGTCTCGACATTCGCCGCA-CGGGCCAGATCAAGGATC 3032 Query 68154 GCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTC 68213 |||| || || ||||| || ||||||||||| || ||||||||| ||||||| | Sbjct 3031 GCGACGATATCGTGGGCAATGCGACTCGCGTGAAGGTGGTAAAGAACAAGGTGGCGCCGC 2972 Query 68214 CGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAAC 68273 | | |||| || || |||| | || ||||| ||||||||| | ||| Sbjct 2971 CTTTCAAGCAGGTCGAATTCGACATCATGTATGGCGAAGGCATTTCCAAGATCGGCGAGA 2912 Query 68274 TCCTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCA 68327 ||||||| ||| ||| ||| | || ||||||| || || ||||||| Sbjct 2911 TCCTCGATCTGGGCGTGAAGGCCGGGATTGTCGAGAAGTCGGGTGCGTGGTTCA 2858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247442524951968