Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq454 91.5 1e-13 >seq454 Length=44262 Score = 91.5 bits (100), Expect = 1e-13 Identities = 175/253 (69%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 34729 ACATATGCATA--TCCAATCATTT-CCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGC 34784 ||||||| ||| | ||||||| ||||| || || |||| || | ||||| || || Sbjct 41013 ACATATGGATAGTTTAAATCATTAGCCTCCTCTTAATCTCAAAACTAAGTGAAGTGTTGA 41072 Query 34785 TCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGA 34844 | ||||| | |||||||||||| || || | | | || || | || ||||| || | Sbjct 41073 T-TCCTTTTAAATGTTATAGTCTGAAAGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAA 41131 Query 34845 AGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGG 34904 |||| |||| || | || | || | || |||||||| | ||||| |||||| | Sbjct 41132 AGATAAGTCTTTATTAATCGGGTGGGATTCCTTCCTTGTCTTAGATTTTGGCTTTGACAG 41191 Query 34905 ATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTA 34964 | || | ||| | || ||||||| || || |||||||| ||||| ||||| | Sbjct 41192 CATCAATTGTGTCAGATGGTTCAACATCAAGAGTAATTGTCTTTCCTGTGAGTGTCTTGA 41251 Query 34965 CAAAGATCTGCAT 34977 ||||||| | ||| Sbjct 41252 CAAAGATTTACAT 41264 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 ||||||| || || |||| || | ||||| || || | ||||| | |||||||||||| Sbjct 41492 TTCCTCCTCTTAATCTCAAAACTAAGTGAAGTGTTGAT-TCCTTTTAAATGTTATAGTCT 41550 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || | | | || || | || ||||| || ||||| |||| ||| | || | Sbjct 41551 GAAAGTGTTCTTCCGTCTTCTAATTATTTTCCTGCAAAGATAAGTCTTTGTTAATCGGGT 41610 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || |||||||| | ||||| |||||| | | || | ||| | || Sbjct 41611 GGGATTCCTTCCTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCAGATGGTTCA 41670 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || |||||||| ||||| |||||||| || || | ||| Sbjct 41671 ACATCAAGAGTAATTGTCTTTCCTGTGAGTGTCTTTACGAAAATTTACAT 41720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325683487832174