Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2232 129 2e-25 seq757 87.8 5e-13 >seq2232 Length=1021 Score = 129 bits (142), Expect = 2e-25 Identities = 232/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 37170 GGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTC 37229 ||| |||||||| || ||| ||||||||||||| |||||||| ||||||||||||||| Sbjct 848 GGTGACCCGCAAGGGCGCTATTCGGGCCCGCGATGGCGACCTTGGCATCATCCCTGGCAG 789 Query 37230 GATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 |||||| | || | |||||| |||||||| || || || | |||| ||| Sbjct 788 CATGGGTCAGCGCTCCTACATCGTGCGCGGCAAAGGCAACCAGGACAGCTACTGCAGTTG 729 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 |||||| || ||||| || ||| || | | |||| ||| ||||| | Sbjct 728 CAGCCATGGGGCCGGCCGCGCCATGTCACGCACAGCAGCACGCCGCAAGTTCAGCCTGAC 669 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 || | |||| ||| |||| |||| |||||||| || | | ||| | ||||| Sbjct 668 CGAGTTGGTGGCGCAGACCCAAGGGGTCGAATGCCGCAAGGACGATGCGGTGCTGGACGA 609 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 | || | |||||||||||||| ||| ||||||| | || || |||| ||| | || Sbjct 608 AATTCCGGGCGCTTACAAGGACATTGATCAGGTCATGACTGCTCAGTCCGATCTGATTGA 549 Query 37470 CATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGG 37508 | || ||||| || || ||| | ||||| || || Sbjct 548 GGTTGTTCACACCTTGAAGCAGGTCATGTGCGTTAAAGG 510 >seq757 Length=13703 Score = 87.8 bits (96), Expect = 5e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 21072 CGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCTGAGCT 21131 || ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||| Sbjct 10686 CGTCAGGATTCGAACCTGAGACCGTCTGCTTAGAAGGCAGATGCTCTATCCAGCTGAGCT 10627 Query 21132 ACG 21134 ||| Sbjct 10626 ACG 10624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139279319744152