Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq56 147 2e-30 seq114 136 3e-27 seq337 127 2e-24 seq287 127 2e-24 seq128 122 7e-23 seq454 120 2e-22 seq507 116 3e-21 seq13 105 5e-18 >seq56 Length=265680 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || || | || || |||||||| || |||||||||| |||||||||||| | | Sbjct 113496 CCTCCTCTTAATCTCAATACTAAATGAAGAGTTGATTCTTTTTAAATGTTATAATCTGAA 113437 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || ||||| || || ||| | |||||||||| ||||| || ||| Sbjct 113436 AGAGTTCTTCCATCTTCAAGTTGCTTTCCTGCAAAAATCAATCTTTATTGATCAGGAGGA 113377 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| |||| ||| || | || |||| || | ||||| ||| ||||||| Sbjct 113376 ATTCCTTCTTTATCTTA-AATCTTAGCCTTAACAGCATCAATGGTGTCTGAAGGTTCTAC 113318 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || || || |||||||||||||| || | ||| Sbjct 113317 ATCAAGTGTGATAGTCTTTCCCGTCAAGGTTTTAACAAAAATTTACAT 113270 >seq114 Length=165420 Score = 136 bits (150), Expect = 3e-27 Identities = 175/238 (74%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || ||||| || || ||||| |||| ||| |||||||| | Sbjct 153365 TCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATCTGA 153306 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 153305 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 153246 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || |||||||||| |||||| | ||||||| |||| |||||| || |||||| Sbjct 153245 AATTCCTTCTTTGTCTTA-AATTTTAGCCTTGACAGCATCTATAGTGTCTGATGGTTCTA 153187 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCA---TTTTAAA 29792 | |||||||| || ||||| |||||||| ||||||||||| || | || ||||||| Sbjct 153186 CATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTACATAGTTTTAAA 153129 Score = 131 bits (144), Expect = 1e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || ||||| || || ||||| |||| |||||||||||| | Sbjct 164282 TCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCTGA 164341 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || ||| || ||| | || | ||||| | ||| || || Sbjct 164342 AAGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 164401 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 164402 GATTCCTTCCTTGTCTT-AAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 164460 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | |||||||| ||||| || |||||||| ||||| |||||||| | ||||| Sbjct 164461 CATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTT 164511 Score = 129 bits (142), Expect = 5e-25 Identities = 173/238 (73%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| || || || ||||| | || || || || || || ||||| |||| |||||||| Sbjct 165072 ATCATTAGCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTAT 165131 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 |||| | || || | ||| || | || ||| || ||| | || | ||||| | || Sbjct 165132 AATCTGAAAGTGTTCTTCCATCTTCTAATTATTTTCCTGCAAAAATGAGTCTTTATTAAT 165191 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAA 29730 | || || || || || ||||||| |||||| | ||||||| || | |||||| || Sbjct 165192 CAGGTGGGATTCCTTCCTTGTCTT-AAATTTTAGCCTTGACAGCGTCAATAGTGTCTGAT 165250 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 |||| || |||||||| ||||| || |||||||| ||||| |||||||| | ||||| Sbjct 165251 GGTTCAACATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTTACAAATATTTACATTT 165308 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || ||||| || || ||||| |||| |||||||||||| | Sbjct 144112 TCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCTGA 144053 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| | || Sbjct 144052 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAAGTGG 143993 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTT-GACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||||| | ||||| ||| | |||||| || |||| | Sbjct 143992 GATTCCTTCCTTGTCTTA-AATTTTTGCCTCGACAGCTTCAATAGTGTCTGATGGTTCAA 143934 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | |||||||| || ||||| |||||||| ||||||||||| || | ||||| Sbjct 143933 CATCAAGAGTGATGGTTTTACCAGTTAATGTTTTAACAAAAATTTTCATTT 143883 Score = 125 bits (138), Expect = 6e-24 Identities = 172/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || ||||| || || ||||| |||| |||||||||||| | Sbjct 163561 TCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATGTTATAATCTGA 163620 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 163621 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 163680 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 163681 GATTCCTTCCTTGTCTT-AAATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 163739 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT--TTTAAA 29792 | |||||||| || ||||| || ||||| ||||||||||| || ||||| |||||| Sbjct 163740 CATCAAGAGTGATGGTTTTACCGGTTAATGTTTTAACAAAAATTTGCATAGTTTAAA 163796 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || || || || || ||||| |||| |||||||||||| | Sbjct 141192 TCCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAATCTGA 141133 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 141132 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 141073 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 141072 AATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCATCAATAGTGTCTGATGGTTCAA 141014 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| || ||||| || ||||| ||||||||||| || ||||| || Sbjct 141013 CATCAAGAGTGATTGTTTTACCTGTTAATGTTTTAACAAAAATTTGCATATT 140962 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || || ||||| || || ||||| |||| ||| |||||||| | Sbjct 139734 TCCACCTCTTAATCTCAAAACTAAATGGAGAGTTGATTCCTTTTAAATATTATAATCTGA 139675 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 139674 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 139615 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || || |||| |||||| | ||||||| || | ||||| || |||| | Sbjct 139614 GATTCCTTCCTTATCTTA-AATTTTAGCCTTGACAGCGTCAATGGTGTCTGATGGTTCAA 139556 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| ||||| || |||||||| ||||||||||| || ||||| || Sbjct 139555 CATCAAGAGTGATAGTCTTTCCAGTTAATGTTTTAACAAAAATTTGCATATT 139504 Score = 102 bits (112), Expect = 6e-17 Identities = 167/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| || || || ||||| | || || || || || || ||||| |||| |||||||| Sbjct 164048 ATCATTAGCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTAT 164107 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 |||| | || || | ||| || | || || || ||| | || | ||||| | || Sbjct 164108 AATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAAT 164167 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAA 29730 | || || || || || ||||||| |||||| | ||||||| || | |||||| || Sbjct 164168 CAGGTGGGATTCCTTCCTTGTCTT-AAATTTTAGCCTTGACAGCGTCAATAGTGTCTGAT 164226 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | |||||||| || ||||| ||||| ||||| ||| | || || | |||| Sbjct 164227 GGTTCAGCATCAAGAGTGATGGTTTT-CCAGTCAAGGTCTTAGCGAAAATTTACATT 164282 >seq337 Length=64228 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || ||| || || || || ||||| |||| ||||||||| || | Sbjct 61540 TCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGA 61481 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 61480 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 61421 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 61420 GATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 61362 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| |||||||| || |||| |||||||||||||| | |||||| Sbjct 61361 CATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 61310 Score = 127 bits (140), Expect = 2e-24 Identities = 173/239 (72%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| || || || || || | || ||| || ||||| || ||||| |||| |||||||| Sbjct 62548 ATCATTAGCCACCTCTTAATCTCAACACTAAGTGAAGAGTTGATTCCTTTTAAATGTTAT 62489 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 | || | || || | ||| || | || || || ||| | || | ||||| | || Sbjct 62488 AGTCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAAT 62429 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAA 29730 | || || || || || ||||||| |||||| | ||||||| || | |||||| || Sbjct 62428 CAGGTGGGATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGAT 62370 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||| || |||||||| |||||||| || |||| |||||||||||||| | |||||| Sbjct 62369 GGTTCAACATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 62311 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || ||| || || || || ||||| |||| ||||||||| || | Sbjct 63312 TCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGA 63253 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 63252 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 63193 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 63192 GATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 63134 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| |||||||| || |||| |||||||||||||| | |||||| Sbjct 63133 CATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 63082 Score = 96.9 bits (106), Expect = 3e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | || | ||||| | ||| || || || || || ||||||| |||||| Sbjct 64227 TTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGGGATTCCTTCCTTGTCTTA-AATTTT 64169 Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| || | |||||| || |||| || |||||||| |||||||| || || Sbjct 64168 AGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACATCAAGAGTAATAGTTTTTCCTGT 64109 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 || |||||||||||||| | |||||| Sbjct 64108 TAGTGTTTTAACAAATATTTACATTTT 64082 >seq287 Length=75303 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || ||| || || || || ||||| |||| ||||||||| || | Sbjct 756 TCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGA 697 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 696 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 637 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 636 GATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 578 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| |||||||| || |||| |||||||||||||| | |||||| Sbjct 577 CATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 526 Score = 127 bits (140), Expect = 2e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || ||| || || || || ||||| |||| ||||||||| || | Sbjct 2767 TCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGA 2708 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 2707 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 2648 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 2647 GATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 2589 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| |||||||| || |||| |||||||||||||| | |||||| Sbjct 2588 CATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACATTTT 2537 Score = 122 bits (134), Expect = 7e-23 Identities = 169/233 (73%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || ||| || || || || ||||| |||| ||||||||| || | Sbjct 1762 TCCACCTCTCAATCTCAACACTAAGTGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGA 1703 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | || || || ||| | || | ||||| | ||| || || Sbjct 1702 AAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAATCAGGTGG 1643 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||||| |||||| | ||||||| || | |||||| || |||| | Sbjct 1642 GATTCCTTCCTTGTCTTA-AATTTTAGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAA 1584 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGC-ATTTT 29789 | |||||||| |||||||| || |||| |||||||||||||| | | ||||| Sbjct 1583 CATCAAGAGTAATAGTTTTTCCTGTTAGTGTTTTAACAAATATTTACTATTTT 1531 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || || ||||| |||| ||||||||| || | || | ||| | | || Sbjct 3742 TGGAGAGTTGATTCCTTTTAAATGTTATAGTCTGAAAGTATTTTTCCATCTTTTAATTAC 3683 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || || ||| | || | ||||| | || ||||| || || || |||| |||||| Sbjct 3682 TTTCCTGCAAAAATAAGTCTTTATTAATAAATTGGAATTCCTTCCTTTTCTTA-AATTTT 3624 Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | ||||||| || | |||||| || |||| || |||||||| |||||||| || || Sbjct 3623 AGCCTTGACAGCGTCAATAGTGTCTGATGGTTCAACATCAAGAGTAATAGTTTTTCCTGT 3564 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 || |||||||||||||| | |||||| Sbjct 3563 TAGTGTTTTAACAAATATTTACATTTT 3537 >seq128 Length=150569 Score = 122 bits (134), Expect = 7e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || ||||| || || |||||||||| ||| |||||||| | || || | ||| ||| Sbjct 58044 ACTAAATGGAGAGTTGATTCTTTTTAAATATTATAATCTGAAAGAGTTCTTCCATCTTCG 57985 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 ||||| || || ||| | |||||||||| | ||| || ||||| || ||||| |||| Sbjct 57984 AGTTGCTTTCCTGCAAAAATCAATCTTTATTAATCAGGTGGAATTCCTTCTTTATCTTA- 57926 Query 29698 AATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | || |||| || | || || ||| | ||||| |||||||| || || || Sbjct 57925 AATCTTAGCCTTAACAGCATCAATTGTATCTGAAGGCTCTACATCAAGAGTGATGGTCTT 57866 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || || | |||||||||||| || | ||| ||| Sbjct 57865 TCCCGTCAGGGTTTTAACAAAAATTTACATATTA 57832 >seq454 Length=44262 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| ||||| | || || || ||||| || ||||| |||| ||||||||||| | Sbjct 41265 TCCTCCTCTCAATCTCAAAACTAAGTGAAGTGTTGATTCCTTTTAGATGTTATAATCTGA 41324 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | | ||| || | || ||| ||||| | || | ||||| | ||| || || Sbjct 41325 AAGTGTTCTACCATCTTCTAATTATTTTCCAGCGAAGATAAGTCTTTATTAATCGGGTGG 41384 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||||| | ||| |||||||| || | |||||||| |||| || Sbjct 41385 GATTCCTTCCTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCAGATGGTTCAAC 41444 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||||| |||||||| || || | || || ||||| || | |||| Sbjct 41445 ATCAAGAGTAATAGTTTTTCCTGTGAGTGTCTTGACAAAGATTTACATT 41493 >seq507 Length=36014 Score = 116 bits (128), Expect = 3e-21 Identities = 170/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| || || || ||||| | || || || || || || ||||| |||| |||||||| Sbjct 35722 ATCATTAGCCACCTCTCAATCTCAAGACTAAGTGGAGAGTTGATTCCTTTTAAATGTTAT 35663 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 |||| | || || | ||| || | || || || ||| | || | ||||| | || Sbjct 35662 AATCTGAAAGTGTTCTTCCATCTTCTAATTACTTTCCTGCAAAAATGAGTCTTTATTAAT 35603 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAA 29730 | || || || || || ||||||| |||||| | ||||||| || | |||||| || Sbjct 35602 CAGGTGGGATTCCTTCCTTGTCTT-AAATTTTAGCCTTGACAGCGTCAATAGTGTCTGAT 35544 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 |||| || |||||||| || ||||| ||||| ||||| ||||| || || | ||||| Sbjct 35543 GGTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAGGTCTTAACGAAAATTTACATTT 35486 >seq13 Length=521119 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | | || || |||||||| || |||||||||| |||||||||||| | | Sbjct 46020 CCTCCTCTGAGTCTCAATACTAAATGAAGTGTTGATTCTTTTTAAATGTTATAATCAGAA 46079 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || | || || |||||| | || ||||||| | ||| || || Sbjct 46080 AGAGTTCTTCCATCCTCTAATTACTTTCCAGCAAAAATTAATCTTTATTAATCAGGAGGG 46139 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||||| | ||| || |||| || | || || || | || || Sbjct 46140 ATTCCTTCTTTGTCTTAGATCTTTGCCTTAACAGCATCGATGGTATCCGATGGCTCAACA 46199 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 ||||| || || || ||||| || | ||| |||||||| || | ||| ||| Sbjct 46200 TCAAGTGTGATGGTCTTGCCTGTGAGGGTCTTAACAAAAATTTACATATTA 46250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385208185860786