Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1032 89.7 5e-13 >seq1032 Length=4102 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/194 (69%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 148840 ATCGAGCGTATNNNNNNNNNNGAAGAAGAGAAGAAGACGATCGGCGATGACATCAAGGAC 148899 ||||||||||| |||||||| |||||| ||| |||| |||||||||||| Sbjct 1666 ATCGAGCGTATCGAGCGTCTGGAAGAAGAAAAGAAGGGCATCAGCGACGACATCAAGGAC 1725 Query 148900 GTCTACGGCGATGCCAAAGGAAATGGCTTCGACACCAAGATCTTGAAGAAGGTCATCAAC 148959 ||||| ||| | ||| | | |||| ||| ||||| ||||| |||| || | Sbjct 1726 GTCTATAACGAGGGCAAGGCCACCGGCTATGACCCCAAGGCGATGAAGCAGGTGGTCCGC 1785 Query 148960 ATCCGCAAGAAGGATGAGCAGGAGCGCATGGAAGAGGAAGCAATCCTCGATACGTATCTC 149019 |||||||||| | | | || |||| |||| ||||||| ||||| || || ||| Sbjct 1786 ATCCGCAAGATGAAGCCTGACGACCGCAAGGAACAGGAAGCGATCCTGGAGGTTTACCTC 1845 Query 149020 GCTGCTCTCGGCAT 149033 ||||| ||||| Sbjct 1846 AACGCTCTGGGCAT 1859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500484522860960