Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq711 104 2e-17 >seq711 Length=17244 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 141403 GCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTGCAAATCC 141462 |||||||| || || | |||||| || || ||| |||||||||||||| | || | | Sbjct 10085 GCAATGTTAAAAGGGACGCCCAAAAATACATCAGCACTTCTTTGATACAATTGTAGTGAC 10026 Query 141463 AAATAGCCATTACGCACATTAAACTGATAGAACATATGACAAGGCGGTAATGCCATATAT 141522 || | |||| |||| ||||||| | || ||||||||||| ||| ||||||| | Sbjct 10025 AATTTTCCATCTGCTACATAAAACTGAAACAATGCATGACAAGGCGCTAAAGCCATATTT 9966 Query 141523 TTAAGTTCAGCTGGATTCCATGCAGAAACAATTTGACGCCTATCATTCGGCAGTTTTTTA 141582 || ||| |||| |||||| |||||||| || | | ||| || || ||| || Sbjct 9965 GGAATTTCGGCTGCATTCCAAGCAGAAACGATAAGTCTTCTAGAATCAGGATTTTTCTTG 9906 Query 141583 ATACGATCAATAACTTCTATAATTTGGTCTAC 141614 || | || | || |||| ||||||||||| Sbjct 9905 ATTTGCTCTACTACCTCTACGATTTGGTCTAC 9874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534182734631920