Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq711 134 2e-26 >seq711 Length=17244 Score = 134 bits (148), Expect = 2e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 197695 TGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAAGGTTTCCCGTTAGTCACGACTAA 197754 ||| ||||| ||| |||| | ||||||| ||| ||||| || || || ||||| || Sbjct 9633 TGTTTTTGGTTACCAATTGCGATATGATTTGTCTAAGGGTTTTCCTTTGGTAACGACCAA 9692 Query 197755 GAAACTCCACCTGCGTTCTATTATCCATGAACTGCTGTGGTTCCTTAGTGGGGATACCAA 197814 ||| | || | |||||||| ||||| |||| ||||| || | || ||||| || Sbjct 9693 AAAAGTGCATTTAAAGTCTATTATTTATGAATTGCTTTGGTTTCTAAAAGGCGATACAAA 9752 Query 197815 CACCAAATATCTGGAAGATAACGGCGTTACCATTTGGCGGGAGTGGCAAGATGAAAATGG 197874 || ||||||||| |||||| || ||| |||||||| || ||| ||| |||||||| Sbjct 9753 CATCAAATATCTTACAGATAATGGTGTTTCCATTTGGAATGAATGGGCAGACGAAAATGG 9812 Query 197875 GAACCTTGGCCCCCTGTATGGTGCACAATGGAGACGTTGGAAAG 197918 || ||||| || | || || |||||||||||| |||| ||| Sbjct 9813 AAATCTTGGTCCAGTTTACGGAGCACAATGGAGAACTTGGGAAG 9856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769171043397680