Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_028843.1 Length=75816 Score E Sequences producing significant alignments: (Bits) Value seq1240 82.4 4e-11 >seq1240 Length=2590 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA 66119 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1650 GGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTA 1704 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA 66119 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1753 GGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTA 1807 Score = 82.4 bits (90), Expect = 4e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 66065 GGGATCGAACCCCGGACCCGCTGATTAAAAGTCAGCTGCTCTACCAACTGAGCTA 66119 ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 1856 GGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAACTGAGCTA 1910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242479466859162