Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq1055 96.9 1e-15 >seq1055 Length=3925 Score = 96.9 bits (106), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 || |||| ||||| ||| |||||||| || || || |||||||||||||||| || Sbjct 3012 GTAATAGTCCTCG---CGGAACACGAACCAGACCATATCCGCGTCCTGCTCGATCGAGCC 2956 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTT 34163 ||| ||||| ||||| || | | || ||||||| | ||||| |||| | ||| | Sbjct 2955 GGATTCGCGAAGGTCGGAAAGCTGGGGCCGCTTGTCCTCGCGCTGTTCCACCGCACGGCT 2896 Query 34164 GAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCA 34207 |||||| ||||| ||||||| || | | || ||| |||||| Sbjct 2895 GAGCTGGGACAGGGCGATCACCGGAACATGCAGTTCCTTGGCCA 2852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160459529673540