Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq711 89.7 5e-13 >seq711 Length=17244 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 140272 GCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTGCAAATCT 140331 |||||||| || || | |||||| || || ||| |||||||||||||| | || | Sbjct 10085 GCAATGTTAAAAGGGACGCCCAAAAATACATCAGCACTTCTTTGATACAATTGTAGTGAC 10026 Query 140332 AAATAGCCATTACGCACATTAAACTGATAGAACATATGACAAGGTGGTAATGCCATATAT 140391 || | |||| |||| ||||||| | || ||||||||| | ||| ||||||| | Sbjct 10025 AATTTTCCATCTGCTACATAAAACTGAAACAATGCATGACAAGGCGCTAAAGCCATATTT 9966 Query 140392 TTAAGTTCAGCTGGATTCCACGCAGAAACAAT 140423 || ||| |||| |||||| |||||||| || Sbjct 9965 GGAATTTCGGCTGCATTCCAAGCAGAAACGAT 9934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530326847709120