Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_031124.1 Length=76012 Score E Sequences producing significant alignments: (Bits) Value seq1240 84.2 1e-11 >seq1240 Length=2590 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66169 GGTGCCCCCACTAGGGATCGAACCTAGGACCCGAAGATTAAAAGTCTCCTGCTCTACCAA 66228 |||| | |||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct 1637 GGTGGACGCACTAGGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAA 1696 Query 66229 CTGAGCTAT 66237 ||||||||| Sbjct 1697 CTGAGCTAT 1705 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66169 GGTGCCCCCACTAGGGATCGAACCTAGGACCCGAAGATTAAAAGTCTCCTGCTCTACCAA 66228 |||| | |||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct 1740 GGTGGACGCACTAGGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAA 1799 Query 66229 CTGAGCTAT 66237 ||||||||| Sbjct 1800 CTGAGCTAT 1808 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 66169 GGTGCCCCCACTAGGGATCGAACCTAGGACCCGAAGATTAAAAGTCTCCTGCTCTACCAA 66228 |||| | |||||||| |||||||||||||||| |||||| |||| |||||||||||| Sbjct 1843 GGTGGACGCACTAGGGCTCGAACCTAGGACCCGCTGATTAAGAGTCAGCTGCTCTACCAA 1902 Query 66229 CTGAGCTAT 66237 ||||||||| Sbjct 1903 CTGAGCTAT 1911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243106648926338