Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20biaurelia_20[genbank_20GCA_5F000733385.1_202014-07-25] 2,346 sequences; 76,963,137 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq114 89.7 4e-13 >seq114 Length=165420 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 111093 TTTAAAA-ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGG 111151 |||||| |||||||||||||| ||||| || ||||| |||||||| || | || | Sbjct 163796 TTTAAACTATGCAAATTTTTGTTAAAACATTAACCGGTAAAACCATCACTCTTGATGTTG 163737 Query 111152 AACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111211 |||| || || ||| | || || |||||| ||||| ||||| | || Sbjct 163736 AACCATCAGACACTATTGACGCTGTCAAGGCTAAAATTTAAGACAAGGAAGGAATCCCAC 163677 Query 111212 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111271 ||| || |||| || |||| ||| || || |||| |||||| | ||| | | | Sbjct 163676 CTGATTAATAAAGACTCATTTTTGCAGGAAAGTAATTAGAAGATGGAAGAACACTTTCAG 163617 Query 111272 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||||||| || |||| ||||| || || |||||||| ||| Sbjct 163616 ATTATAACATTTAAAAGGAATCAACTCTCCATTTAGTTTTG 163576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421799139626896