Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq48 174 2e-38 seq35 154 2e-32 seq2 145 1e-29 seq6 129 9e-25 seq753 113 7e-20 seq760 102 1e-16 seq751 96.9 5e-15 seq725 95.1 2e-14 seq39 93.3 6e-14 seq758 89.7 8e-13 >seq48 Length=276533 Score = 174 bits (192), Expect = 2e-38 Identities = 379/564 (67%), Gaps = 5/564 (1%) Strand=Plus/Minus Query 205461 ATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGA 205520 |||||| | |||| |||||| |||||||| || ||||| || || || | |||| ||| Sbjct 43038 ATAAGTTAGTAAAGCATAACTGGCAACATTGAAAGGTACTCCCAATCCAAAATCACATGA 42979 Query 205521 TCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACATGAAATTGT-ACAAAAC 205579 ||| | |||||| ||| | | | | |||| |||| ||||| |||| || Sbjct 42978 TCTCTAATACATCATACAACTTAAACG---ACCATTAGACACATAAAATTAAGACAATAC 42922 Query 205580 AATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTA 205639 | |||||||| |||| ||||| | | | |||| ||||||||| |||| ||| | Sbjct 42921 A-TGACAAGGAGGTAATGCCATAATCTTTAAATCTGAAGGATTCCAAGCTGATAAACAGA 42863 Query 205640 TATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATC 205699 | ||||| || || || ||||| | || | || | || | | |||||||| | || Sbjct 42862 TTCTTCTACTATCCGGATTGTTTTTAAGTTAGTGAATTACATCTTTCAATTGATCGACTC 42803 Query 205700 CTTGATTTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAA 205759 ||| |||||| |||| || || |||| | |||| ||||||||||| | ||||| || Sbjct 42802 CTTTATTTGTGTAATCTGCATTACAATCAGTGTATTATGCACCAAAATGTCTCCATTAAA 42743 Query 205760 AACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatat 205819 | ||||| | ||| ||||||||| ||| ||||| || || ||| | | | | Sbjct 42742 ATCCATATATTGGTCCTAAATCATTTTCAGCTCTATTCTTTAATCCAATGCTATCCAGGT 42683 Query 205820 attttaatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTAT 205879 ||| | |||||| | ||||| || | || |||| |||| | | || Sbjct 42682 ATTCCCTAGTTCCATTCCCTTCCCATATCTTTATCTTCTTATCAAGTAGAGTTCTACCAT 42623 Query 205880 TAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATT 205939 | || || ||| |||||||| ||||||||||||| || | | || | | || Sbjct 42622 TTGTCTCACCTCTTATGAACCATAACAATTCTTCAACAACACCACGAAAGAATACTTTTT 42563 Query 205940 TTGTTGTAAATAATGGAAATGAATCATCTAATTTATATTTCATAGTTAAACCATATACAG 205999 | ||||| |||||||||||||||| || | || | ||| || | ||| ||| | Sbjct 42562 TAGTTGTTAATAATGGAAATGAATTTTCAAGATTGAAACGCATTGTCTATCCAAATAAGG 42503 Query 206000 TTTTTGTATCTACACCTGTTCTAT 206023 | |||| ||||||||||||||| Sbjct 42502 ATATTGTTCCTACACCTGTTCTAT 42479 >seq35 Length=318860 Score = 154 bits (170), Expect = 2e-32 Identities = 388/585 (66%), Gaps = 17/585 (3%) Strand=Plus/Minus Query 202792 CATATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACA 202851 |||||| | ||| || |||||||| ||| | |||| | ||||||||| ||||| | Sbjct 35083 CATATAACGAATGTTCCCAAATATATTTCTACCAGTCCAAGGTCTATCATGTTTACCAAA 35024 Query 202852 AATTGACCACATACATCCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATC 202911 | |||| | |||| ||||||||||| ||| | |||||||| | ||||||||| Sbjct 35023 AC---ACCAAGCAACTCCAGTATATCCATTTGCATCTCTTCCATCTAAATGATATTTATC 34967 Query 202912 ATTTAAATNNNNNNNNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttt 202971 |||||| | |||||| || || |||| ||||||||| | | ||| Sbjct 34966 ATTTAAGTAAACTAATATTTCAAATGCTCTTTAAGGGGATTCTGTCCATTCAATCACTTT 34907 Query 202972 tttAGCCCAATACATTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTG 203031 |||| ||||||||||||| | |||||| || ||||| | ||| || | ||| Sbjct 34906 TTTACCCCAATACATTCTCATATATCCTGATATCTTACCTTTATGAATTGCTTCTAATTG 34847 Query 203032 TGATGCATTCCATAAATTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATAT 203091 | |||||||| || | ||||||||| ||| ||||||| | ||| ||| || Sbjct 34846 AGCAGCATTCCAATAAATATCATGAGTTTTTGCTTTTTCAAAAGTCTCTAATGAATAGAT 34787 Query 203092 ATGTTTTCTAGTATCATTTTTATGTTCATTTAGTGTTTTTATTGCCCAATTA-TTAGCAC 203150 | || ||| |||| || |||||| | ||||||||| | ||||||| | || | Sbjct 34786 GTATTCTCTCTTATCTTTAGCATGTTCTTCAAGTGTTTTTTTGGCCCAATCAGGTA--AT 34729 Query 203151 CATTTATA-TTATCGTAATTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGA 203209 | || ||| ||||| || || |||| ||| ||||||||| | | |||| | | Sbjct 34728 CCTTCATATTTATCATAGTTGGGATTAAAATTACAAAAATTCATTGACAATTCTCTTCTT 34669 Query 203210 ATAATAGCTTCTTCACAAAAAACTTCTACCGATTTAGGATATAATTTTTTATATTTGTTA 203269 | ||| ||| || |||| | ||| | | || | ||| ||| ||||| | Sbjct 34668 ACAATCAATTCCTCTAAAAATGCGTCT--CTACTT----TCAGATTGTTTGTATTTCATG 34615 Query 203270 ATTTCTA-ATAT-TATTCTTTGAGTTGAAATTTGACCAAAATGTATCCATGGTGATAAAT 203327 |||||| |||| ||| | | | ||||| |||||||| | |||| || |||| Sbjct 34614 GTTTCTAGATATATATACAAT--GGAGAAATCATTCCAAAATGCAGATATGGAGACAAAT 34557 Query 203328 TACTTATTGCATTAGCATTTGGATCATTTCtttttttAGCATAAT 203372 | | | ||||| | ||||||||||| ||||| ||||||| Sbjct 34556 TGGATGTGGCATTCAAAGAAGGATCATTTCTGTTTTTGGCATAAT 34512 >seq2 Length=701642 Score = 145 bits (160), Expect = 1e-29 Identities = 174/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||||||| ||||||| ||||| || ||| | || ||||| || Sbjct 528402 ATGCAAATTTTCGTAAAGACATTAACAGGAAAAACCATCACTCTTGATGTTGAACCATCA 528461 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| | | ||| ||||| |||||||||||||| || ||||| ||| || Sbjct 528462 GACACAATTGATGCAGTCAAAGCTAAAATCCAAGATAAAGAAGGAATCCCACCCGATTAA 528521 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||| ||||| || || |||||| ||||||| ||| | ||||| | ||| || ||| Sbjct 528522 TAAAGACTTATCTTCGCCGGAAAATAATTAGAAGATGGAAGAACACTCTCAGACTACAAT 528581 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 ||||||||||||||||| | || || || || | | ||||||| || |||| Sbjct 528582 ATTCAAAAAGAATCAACACTCCACTTAGTATTGAGACTTAGAGGTGGAATGTAAA 528636 Score = 138 bits (152), Expect = 2e-27 Identities = 174/238 (73%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||| |||| || |||||||| | ||||| ||||| || ||| | || ||||| || Sbjct 527449 ACCATGTAAATTTTCGTAAAGACATTGACAGGAAAAACCATCACTCTTGATGTTGAACCA 527508 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || |||||| | | ||| ||||| |||||||||||||| || ||||| ||| Sbjct 527509 TCAGACACAATTGATGCAGTCAAAGCTAAAATCCAAGATAAAGAAGGAATCCCACCCGAT 527568 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || |||| |||||||| || |||||| ||||||| || | ||||| | ||| || Sbjct 527569 TAATAAAGACTTATTTTCGCTGGAAAATAATTAGAAGACGGAAGAACACTCTCAGACTAC 527628 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 |||||||||||||||||||| | || || || || | | ||||||| || |||| Sbjct 527629 AATATTCAAAAAGAATCAACACTCCACTTAGTATTGAGACTTAGAGGTGGAATGTAAA 527686 Score = 132 bits (146), Expect = 7e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||| | ||||| ||||| || ||| | || ||||| || Sbjct 527679 AATGTAAATCTTCGTCAAGACATTGACAGGAAAAACCATCACTCTTGATGTTGAACCATC 527738 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| | | | ||| ||||| |||| |||||||| || ||||| ||| | Sbjct 527739 AGACACAATTGATGCTGTCAAAGCTAAAATCTAAGACAAAGAAGGAATCCCACCCGATTA 527798 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| ||||| || || |||||| ||||||| ||| | ||||| | ||| || || Sbjct 527799 ATAAAGACTTATCTTCGCCGGAAAATAATTAGAAGATGGAAGAACACTCTCAGACTACAA 527858 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||||||||||||| || | |||||||| || Sbjct 527859 TATTCAAAAAGAATCCACACTTCATTTGGTGTT 527891 Score = 111 bits (122), Expect = 2e-19 Identities = 144/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||| | || || || || || ||| | || || || || Sbjct 528629 AATGTAAATCTTCGTCAAGACATTGACTGGTAAGACCATCACTCTTGACGTT-AACCATC 528687 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| | | | ||| ||||| |||| |||||||| || ||||| ||| | Sbjct 528688 AGACACAATTGATGCTGTCAAAGCTAAAATCTAAGACAAAGAAGGAATCCCACCCGATTA 528747 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| ||||| || || |||||| ||||||| ||| | ||||| | ||| || || Sbjct 528748 ATAAAGACTTATCTTCGCCGGAAAATAATTAGAAGATGGAAGAACACTCTCAGACTACAA 528807 Query 124718 TATTCAAAAAGAATCAAC 124735 |||||||||||||||||| Sbjct 528808 TATTCAAAAAGAATCAAC 528825 >seq6 Length=529034 Score = 129 bits (142), Expect = 9e-25 Identities = 171/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||||||| | |||||||| || || ||||| || ||| | || ||||| || Sbjct 12081 AATGTAAATATTTGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATC 12022 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| ||||| Sbjct 12021 AGATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCA 11962 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || |||||||| ||||| ||||||| || | ||||| | || || || Sbjct 11961 ATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 11902 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 ||||||||| |||||||| | || || ||| || | || |||| || || |||| Sbjct 11901 TATTCAAAAGGAATCAACACTTCACTTAGTTCTAAGATTGAGAGGAGGAATGTAAA 11846 Score = 127 bits (140), Expect = 3e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||||||| | |||||||| || || ||||| || ||| | || ||||| || Sbjct 11098 ATGTAAATATTTGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATCA 11039 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| |||||| Sbjct 11038 GATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCAA 10979 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||| || |||||||| ||||| ||||||| || | ||||| | || || ||| Sbjct 10978 TAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAAT 10919 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 |||||||| |||||||| | || || ||| || | || |||| || || |||| Sbjct 10918 ATTCAAAAGGAATCAACACTTCACTTAGTTCTAAGATTGAGAGGAGGAATGTAAA 10864 Score = 127 bits (140), Expect = 3e-24 Identities = 170/235 (72%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||||||| | |||||||| || || ||||| || ||| | || ||||| || Sbjct 12535 ATGTAAATATTTGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATCA 12476 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| |||||| Sbjct 12475 GATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCAA 12416 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 |||| || |||||||| ||||| ||||||| || | ||||| | || || ||| Sbjct 12415 TAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAAT 12356 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 |||||||| |||||||| | || || ||| || | || |||| || || |||| Sbjct 12355 ATTCAAAAGGAATCAACACTTCACTTAGTTCTAAGATTGAGAGGAGGAATGTAAA 12301 Score = 122 bits (134), Expect = 1e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||||||||| |||||||| | || |||||||| ||| | || ||| | ||| Sbjct 10114 AATGTAAATATTTATTAAGACACTCGCTGGAAAAACTATCACTCTTGATGTTGTACCAAC 10055 Query 124598 TGATACAATTT-CTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| ||| || | ||||| | ||||| ||| | || ||||| || ||||| |||| Sbjct 10054 AGATACTATTGACTCAGTTAAAGCT-AAAATCCAACAAAAGGAAGGAATCCCACCCGATC 9996 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 || |||| || |||||||| ||||| ||||||| | | ||||| | || |||| Sbjct 9995 AATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAAGTGGAAGAACACTCCCTGACTATA 9936 Query 124717 ATATTCAAAAAGAATCAAC 124735 ||||| ||||||||||| Sbjct 9935 ATATTGCTAAAGAATCAAC 9917 Score = 122 bits (134), Expect = 1e-22 Identities = 171/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||| |||||||| | |||||||| || || ||||| || ||| | || ||||| || Sbjct 14860 ATGTAAATATTTGTTAAGACACTCACTGG-AAAACAATCACTCTTGATGTTGAACCATCA 14802 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| |||||| Sbjct 14801 GATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCAA 14742 Query 124659 CAAAGGCT-TATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| || ||||||||| ||||| ||||||| || | ||||| | || || || Sbjct 14741 TAAAGACTCTATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 14682 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 ||||||||| |||||||| | || || ||| || | || |||| || || |||| Sbjct 14681 TATTCAAAAGGAATCAACACTTCACTTAGTTCTAAGATTGAGAGGAGGAATGTAAA 14626 Score = 120 bits (132), Expect = 5e-22 Identities = 172/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||||| || || ||||| || ||| | || ||||| || Sbjct 12308 AATGTAAATTTTCGTTAAGACACTCACTGG-AAAACAATCACTCTTGATGTTGAACCATC 12250 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| ||||| Sbjct 12249 AGATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCA 12190 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || |||||||| ||||| ||||||| || | ||||| | || || || Sbjct 12189 ATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 12130 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 ||||||||| |||||||| | || || ||| || | || |||| || || |||| ||| Sbjct 12129 TATTCAAAAGGAATCAACACTTCACTTAGTTCTAAGATTGAGAGGAGGAATGTAAATATT 12070 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||||| || || ||||| || ||| | || ||||| || Sbjct 10871 AATGTAAATTTTCGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATC 10812 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| ||||| Sbjct 10811 AGATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCA 10752 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || |||||||| ||||| ||||||| || | ||||| | || || || Sbjct 10751 ATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 10692 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||| |||||||| | || || ||| | | || ||||||| Sbjct 10691 TATTCAAAAGGAATCAACACTTCACTTAGTTCTTAGATTGAGAGGTGG 10644 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||||| || || ||||| || ||| | || ||||| || Sbjct 11853 AATGTAAATTTTCGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATC 11794 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| ||||| Sbjct 11793 AGATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCA 11734 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || |||||||| ||||| ||||||| || | ||||| | || || || Sbjct 11733 ATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 11674 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||| |||||||| | || || ||| | | || ||||||| Sbjct 11673 TATTCAAAAGGAATCAACACTTCACTTAGTTCTTAGATTGAGAGGTGG 11626 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| |||| || | |||||||| || || ||||| || ||| | || ||||| || Sbjct 14633 AATGTAAATTTTCGTTAAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATC 14574 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||| ||||| Sbjct 14573 AGATACTATTGATGCAGTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCA 14514 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || |||||||| ||||| ||||||| || | ||||| | || || || Sbjct 14513 ATAAAGACTCATTTTTGCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAA 14454 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||| |||||||| | || || ||| | | || ||||||| Sbjct 14453 TATTCAAAAGGAATCAACACTTCACTTAGTTCTTAGATTGAGAGGTGG 14406 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| | || || ||||||||| |||| || ||||| || ||| | || ||||| || Sbjct 15902 AATGTAGATTTTCATAAAGACATTAACTGGAAAAACAATCACTCTTGATGTTGAACCATC 15843 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| |||||| |||| || ||||| || ||||||||||| Sbjct 15842 AGATACTATTGATGCAGTCAAAGCTAAAATTAAAGAAAAGGAAGGAATCCCACCTGATCA 15783 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | ||| || | |||||| | ||| ||||||| || || || | | || ||||| Sbjct 15782 ATAAAAACTCACTTTTGCTAGTAAATAATTAGAAGACAGATTTTCACTTTATGACTATAA 15723 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGG 124746 ||| |||||||| ||||| | ||||||| Sbjct 15722 TATCCAAAAAGAGTCAACAATTCATTTGG 15694 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||| | || || || ||||||||||| || ||||| || || | || ||||| || Sbjct 9886 AATGTAGATTTTCATTAAGACACTAACTGGAAAAACAATCACCCTTGATGTTGAACCATC 9827 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| | | ||| ||||| ||||| ||||||| || || || ||||| Sbjct 9826 AGATACTATTGATGCAGTCAAAGCTAAAAT-CAAGACTAAGAAGGAATCCCCCCCGATCA 9768 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 | |||| || ||||||| ||||| ||||| | || | ||||| | ||| || || Sbjct 9767 AAAAAGACTAGTTTTTGCTGGAAAGTAATTAAAAGACGGAAGAACACTCTCAGACTACAA 9708 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||||||| ||||| || | || || || | | || ||||||| |||| Sbjct 9707 TATTCAAAAGGAATCCACCCTTCACTTTTTTCTTAGATTGAGAGGTGG-ATTA 9656 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 124638 GAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGT 124697 ||||| || ||||| |||||| |||| || ||||||| || || |||||||||| | Sbjct 16030 GAAGGAATCCCACCAGATCAATAAAGACTAGTTTTTGCTGGTAAGTAATTAGAGGACGGG 15971 Query 124698 CGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTA 124757 ||||| | || ||||||||||||||||||||||| | || |||| ||||| || Sbjct 15970 AGAACACTCTCTGACTATAATATTCAAAAAGAATCAACACTTCACTTGGCATTACGATTG 15911 Query 124758 CGAGGTGGTAT-TAAAAATTCATAAA 124782 |||| || || || | |||||||| Sbjct 15910 AGAGGAGGAATGTAGATTTTCATAAA 15885 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 124555 AGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATT 124614 ||||||| || || |||||||| ||| | || ||||| || | | ||| | | | | Sbjct 15657 AGACACTTACTGGGAAAACTATTACTCTTGATGTTGAACCA--TCAGACACTGTAGATTC 15600 Query 124615 --TAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTT 124672 | |||| ||||| || | || ||||| | |||||| ||||||||| || |||| Sbjct 15599 AGTCAAACCTAAAATCCATGCCAAGGAAGGAACACCACCATGTCAACAAAGACTCCTTTT 15540 Query 124673 TGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATC 124732 ||||||||| ||||| | ||| | | | | || || || |||||||||||||| Sbjct 15539 CGCAGGAAAATAATTATAAGATGGAAGGATTCTCTCTGAGTACAACATTCAAAAAGAATC 15480 Query 124733 AACTTTGCATTTGG 124746 |||| | ||| ||| Sbjct 15479 AACTGTTCATATGG 15466 >seq753 Length=230 Score = 113 bits (124), Expect = 7e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 |||||||| || || ||||| || ||| | || ||||| || ||||| ||| | Sbjct 226 AAGACACTCACTGGAAAAACAATCACTCTTGATGTTGAACCATCAGATACTATTGATGCA 167 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | ||| |||||| |||| || ||||| || ||||| |||||| |||| || |||||| Sbjct 166 GTCAAAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCAATAAAGACTCATTTTT 107 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || ||||| ||||||| || | ||||| | || || ||||||||||| |||||| Sbjct 106 GCTGGAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAATATTCAAAAGGAATCA 47 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || | || || ||| | | || ||||||| Sbjct 46 ACACTTCACTTAGTTCTTAGATTGAGAGGTGG 15 >seq760 Length=219 Score = 102 bits (112), Expect = 1e-16 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 124563 ACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAACAG 124622 || || ||||| || ||| | || ||||| || ||||| ||| | | ||| Sbjct 1 ACTGGAAAAACAATCACTCTTGATGTTGAACCATCAGATACTATTGATGCAGTCAAAGCT 60 Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 |||||| |||| || ||||| || ||||| |||||| |||| || |||||||| ||||| Sbjct 61 AAAATTTAAGACAAGGAAGGAATCCCACCCGATCAATAAAGACTCATTTTTGCTGGAAAG 120 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||||| || | ||||| | || || ||||||||||| |||||||| | || Sbjct 121 TAATTAGAAGACGGAAGAACACTCTCTGACTACAATATTCAAAAGGAATCAACACTTCAC 180 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT-TAAA 124772 || ||| || | || |||| || || |||| Sbjct 181 TTAGTTCTAAGATTGAGAGGAGGAATGTAAA 211 >seq751 Length=235 Score = 96.9 bits (106), Expect = 5e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 |||||| |||| || ||||| || ||||| |||||| |||| || |||||||| ||||| Sbjct 24 AAAATTTAAGACAAGGAAGGAATCCCACCCGATCAATAAAGACTCATTTTTGCTGGAAAG 83 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||||||| || | ||||| | || || ||||||||||| |||||||| | || Sbjct 84 TAATTAGAAGACGGAAGAACACTCTCTGACTACAATATTCAAAAGGAATCAACACTTCAC 143 Query 124743 TTGGTTTTACGTTTACGAGGTGG 124765 || ||| | | || ||||||| Sbjct 144 TTAGTTCTTAGATTGAGAGGTGG 166 >seq725 Length=304 Score = 95.1 bits (104), Expect = 2e-14 Identities = 138/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 124559 ACTAACAGGCAAAACTA-TAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAA 124617 ||| || || ||||| | | ||| | || ||||| || ||||| ||| | | | Sbjct 101 ACTCACTGGGAAAACAAGTCACTCTTGATGTTGAACCATCAGATACTATTGATGCAGTCA 160 Query 124618 AACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAG 124677 || |||||| |||| || ||||| || ||||| |||||| |||| || |||||||| | Sbjct 161 AAGCTAAAATTTAAGACAAGGAAGGAATCCCACCCGATCAATAAAGACTCATTTTTGCTG 220 Query 124678 GAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTT 124737 |||| ||||||| || | ||||| | || || ||||||||||| |||||||| Sbjct 221 GAAAGTAATTAGAAGACGGAAGAACACTCTCTGACTACAATATTCAAAAGGAATCAACAC 280 Query 124738 TGCATTTGGTTTTA 124751 | || || ||| || Sbjct 281 TTCACTTAGTTCTA 294 >seq39 Length=303829 Score = 93.3 bits (102), Expect = 6e-14 Identities = 163/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 |||| ||| |||| ||| | || || ||||||| || || || || | || | ||| Sbjct 62845 AATATTATGTAAATTTTTGTTAAAACCTTAACAGGTAAGACAATCACACTTGATGTCGAA 62904 Query 124593 GCAAATGATACAATTTCTA-ATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651 | ||| || || | | ||||| || || ||| | || || ||||| || || || Sbjct 62905 CCTTCTGACACCATCGATGCAGTTAAAGCA-AAGATTTAGGACAAGGAAGGCATTCCCCC 62963 Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711 |||||| |||| ||||||||||||||||||||| | || || | |||| | ||| Sbjct 62964 CGATCAATAAAGACTTATTTTTGCAGGAAAACAACTTGAAGACGGAAGAACTCTTTCAGA 63023 Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||| ||||| |||| |||||||| | || || || | | ||| |||| ||| Sbjct 63024 TTACAATATCTAAAAGGAATCAACCCTTCACTTAGTACTTAGATTAAGAGGAGGT 63078 >seq758 Length=219 Score = 89.7 bits (98), Expect = 8e-13 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTG-CAGGAAA 124681 |||||| |||| || ||||| || ||||| |||||| |||| || ||||||| | ||||| Sbjct 32 AAAATTTAAGACAAGGAAGGAATCCCACCCGATCAATAAAGACTCATTTTTGTCTGGAAA 91 Query 124682 ACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCA 124741 ||||||| || | ||||| | || || ||||||||||| |||||||| | || Sbjct 92 GTAATTAGAAGACGGAAGAACACTCTCTGACTACAATATTCAAAAGGAATCAACACTTCA 151 Query 124742 TTTGGTTTTACGTTTACGAGGTGG 124765 || ||| | | || ||||||| Sbjct 152 CTTAGTTCTTAGATTGAGAGGTGG 175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755448662633600