Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq10 201 3e-46 seq39 161 2e-34 seq6 159 8e-34 seq2 145 2e-29 seq753 141 2e-28 seq760 132 1e-25 seq751 127 5e-24 seq725 122 2e-22 seq777 96.9 8e-15 >seq10 Length=460275 Score = 201 bits (222), Expect = 3e-46 Identities = 448/661 (68%), Gaps = 16/661 (2%) Strand=Plus/Minus Query 268801 CTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGC 268860 ||||| ||||||| |||| ||||| ||||||||| ||||| ||| | | || Sbjct 101654 CTTAA-AGATTGGGAAAAATTAAAGTCAGAAGAAAAGCACTTTATTAAATATGTATTGGC 101596 Query 268861 GTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGA 268920 || ||||| | |||||||| || || || || || ||| | | | |||||| ||| Sbjct 101595 TTTCTTTGCTGCCAGTGATGGAATTGTCAATGAGAACTTAGCATAACAATTCTGTACAGA 101536 Query 268921 GGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCA 268980 || || ||||| |||||||||||||| || ||||| | || || || |||||||| || Sbjct 101535 AGTTCAAATTCCAGAAGCCAGATGTTTCTATGGATTTTAAATTGCCATGGAAAATATACA 101476 Query 268981 TTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAG 269040 ||| || | || ||| || || |||||||| || |||| | || ||||| || Sbjct 101475 TTCTGAAACATATTCTCTCTTGATTGATACTTACATCACTGATGAAAATGAAAAAAAT-- 101418 Query 269041 ACTATTTTCTTCTATGAGA---ACTATG-GACTGTGTGAGaaaaaaaT-CTGAATGGGCT 269095 || || || | ||| | || ||| | |||| |||| || | |||||| Sbjct 101417 --TACTTACTCC-ATGCCATTGACAATGTGCCTGTAATTCAAAAGAAGGCATCATGGGCA 101361 Query 269096 CTGAAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTA 269155 |||||||||| || |||| | | | | ||||| || ||||||| || ||||| Sbjct 101360 ATGAAATGGATCAATGATAATGATTCATTTGCTGAAAGACTAATTGCTTTCGCTGCTGTT 101301 Query 269156 GAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTT 269215 ||||| || ||||| || || |||||| || || |||||| | || || ||| ||| Sbjct 101300 GAAGGCATCTTCTTCTCTGGTTCTTTTTGTGCCATTTTTTGGATCAAAAAGAGATCACTT 101241 Query 269216 ATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGAC 269275 ||||||||| |||| ||||| || ||||||||| || || ||||| ||||| || Sbjct 101240 ATGCCAGGACTAACATTCTCCAATGAATTGATATCAAGAGATGAAGGATTACATACTGAT 101181 Query 269276 TTCGCTTGTTTATTATTTACTAATTATCT-TTCACACAAACCTTCTCAAGATAGAGTATA 269334 || ||||||||| | ||| || || | ||| | |||| || | | ||| | | Sbjct 101180 TTTGCTTGTTTA--CTCTAC-AAGCATATGGTCA-ATAAACTATCCAATCAAAGAATCCA 101125 Query 269335 CGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTAT 269394 |||||||| || |||||| || | |||| ||||| | | ||||| || | | Sbjct 101124 TGAAATTATTTCATCTGCTGTTGCTATTGAAAAGGAATTCATTAGTGAAGCATTACCAGT 101065 Query 269395 CGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAG 269454 || | || || |||||| | | |||| | |||| ||| | || || ||||||| Sbjct 101064 AGAATTAATTGGAATGAATTCAACACTCATGAAACAATACATTGAATTTGTTGCTGATAG 101005 Query 269455 A 269455 | Sbjct 101004 A 101004 >seq39 Length=303829 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| |||||||||| || | || ||||| || | ||||| || || || Sbjct 63077 CCTCCTCTTAATCTAAGTACTAAGTGAAGGGTTGATTCCTTTTAGATATTGTAATCTGAA 63018 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| |||||||| ||||||||||| |||||||| || || | |||||| || || Sbjct 63017 AGAGTTCTTCCGTCTTCAAGTTGTTTTCCTGCAAAAATAAGTCTTTATTGATCGGGGGGA 62958 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||| || |||| |||||||||||| || || | ||| || |||||| || Sbjct 62957 ATGCCTTCCTTGTCCTAAATCTTTGCTTTAACTGCATCGATGGTGTCAGAAGGTTCGACA 62898 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || |||||||| || | ||||| ||||| || | ||| Sbjct 62897 TCAAGTGTGATTGTCTTACCTGTTAAGGTTTTAACAAAAATTTACAT 62851 >seq6 Length=529034 Score = 159 bits (176), Expect = 8e-34 Identities = 197/269 (73%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 10869 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 10928 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| |||||||||| || |||||||||||||| || || | |||||| || Sbjct 10929 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 10988 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 10989 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 11048 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACA 104569 || || || || || || || ||||| ||||| || |||||||| | ||| || | || Sbjct 11049 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATGTTTTCTA-- 11106 Query 104570 GTATTTATTAGAGTAATAATTATTTATTA 104598 |||| | | |||||||| | ||||| Sbjct 11107 --TTTTAATTTATTAATAATTTTCTATTA 11133 Score = 159 bits (176), Expect = 8e-34 Identities = 197/269 (73%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 12306 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 12365 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| |||||||||| || |||||||||||||| || || | |||||| || Sbjct 12366 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 12425 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 12426 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 12485 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTACA 104569 || || || || || || || ||||| ||||| || |||||||| | ||| || | || Sbjct 12486 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATGTTTTCTA-- 12543 Query 104570 GTATTTATTAGAGTAATAATTATTTATTA 104598 |||| | | |||||||| | ||||| Sbjct 12544 --TTTTAATTTATTAATAATTTTCTATTA 12570 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 11851 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 11910 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| |||||||||| || |||||||||||||| || || | |||||| || Sbjct 11911 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 11970 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 11971 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 12030 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| ||||| || |||||||| | |||| Sbjct 12031 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATT 12081 Score = 150 bits (166), Expect = 4e-31 Identities = 197/270 (73%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 14631 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 14690 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAAT-TAGCCTCTGTTGATCAGG 104448 || || ||||| |||||||||| || |||||||||||||| || || | |||||| || Sbjct 14691 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATAGAGTCTTTATTGATCGGG 14750 Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 14751 TGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTC 14810 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGTAC 104568 || || || || || || || ||||| ||||| || |||||||| | ||| || | || Sbjct 14811 AACATCAAGAGTGATTGT-TTTCCAGTGAGTGTCTTAACAAATATTTACATGTTTTCTA- 14868 Query 104569 AGTATTTATTAGAGTAATAATTATTTATTA 104598 |||| | | |||||||| | ||||| Sbjct 14869 ---TTTTAATTTATTAATAATTCTCTATTA 14895 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||||| |||| || | ||| ||||| || |||||||| |||||||| Sbjct 10643 TCCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGA 10702 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| || |||||||||||||| || || | |||||| || || Sbjct 10703 GAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGG 10762 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||| || || | ||| || ||||| || || | ||||| ||||| || Sbjct 10763 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAAC 10822 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| ||||| || || || || | |||| Sbjct 10823 ATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 10871 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||||| |||| || | ||| ||||| || |||||||| |||||||| Sbjct 11625 TCCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGA 11684 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| || |||||||||||||| || || | |||||| || || Sbjct 11685 GAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGG 11744 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||| || || | ||| || ||||| || || | ||||| ||||| || Sbjct 11745 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAAC 11804 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| ||||| || || || || | |||| Sbjct 11805 ATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 11853 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||||| |||| || | ||| ||||| || |||||||| |||||||| Sbjct 14405 TCCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGA 14464 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| || |||||||||||||| || || | |||||| || || Sbjct 14465 GAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGG 14524 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||| || || | ||| || ||||| || || | ||||| ||||| || Sbjct 14525 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAAC 14584 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| ||||| || || || || | |||| Sbjct 14585 ATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 14633 Score = 143 bits (158), Expect = 6e-29 Identities = 176/238 (74%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 104325 TATTTA--TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 |||||| |||| ||||| | || || |||| || | ||| ||||| || |||||||| Sbjct 12072 TATTTACATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATT 12131 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 |||||||| || ||||| |||||||||| || |||||||||||||| || || | ||| Sbjct 12132 GTAGTCAGAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTG 12191 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| || || |||||||| || || | ||| || ||||| || || | ||||| Sbjct 12192 ATCGGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGA 12251 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || || || || || || || ||||| ||||| || || || || | |||| Sbjct 12252 TGGTTCAACATCAAGAGTGATTGT-TTTCCAGTGAGTGTCTTAACGAAAATTTACATT 12308 Score = 123 bits (136), Expect = 6e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||| | | |||| | || || | ||| |||||||| ||||||||||||| Sbjct 9884 ATTCCTCCTTTCAATATAAGAAGTAAGTGAATTGTTGATTCTTTAGCAATATTATAGTCA 9943 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || ||||| || ||||| || |||||||||||||| || || | |||||| || Sbjct 9944 GGGAGTGTTCTTCCACTTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 10003 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || | || || || ||||| || || | ||||| | ||| | Sbjct 10004 GGGATTCCTTCCTTTTGTTGGATTTTAGCTTTAACTGAGTCAATAGTATCTGTTGGTACA 10063 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || ||||| || |||| ||||| || | |||||| | |||||| Sbjct 10064 ACATCAAGAGTGATAGTTTTTCCAGCGAGTGTCTTAATAAATATTTACATTTT 10116 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 104329 TATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTC 104388 || ||| ||||| | ||||| | | || | || ||||| || |||||||| ||||| Sbjct 9656 TAATCCACCTCTCAATCTAAGAAAAAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTC 9715 Query 104389 AGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGG 104448 || || ||||| ||||||| || || ||||||||||||| ||| || | |||||| || Sbjct 9716 TGAGAGTGTTCTTCCGTCTTTTAATTACTTTCCAGCAAAAACTAGTCTTTTTTGATCGGG 9775 Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 || |||||||||| || || || || ||||| || || | ||||| ||||| Sbjct 9776 GGGGATTCCTTCTTAGTCTTG-ATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTC 9834 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| ||||| || | || |||| |||| Sbjct 9835 AACATCAAGGGTGATTGTTTTTCCAGTTAGTGTCTTAATGAAAATCTACATT 9886 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 ||| |||||||| ||||||||||||||||| || ||||| ||||| |||| || || || Sbjct 15932 TGTTGATTCTTTTTGAATATTATAGTCAGAGAGTGTTCTCCCGTCCTCTAATTACTTACC 15991 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 |||||||| ||| || | |||||| || || |||||||| | || || || ||||| Sbjct 15992 AGCAAAAACTAGTCTTTATTGATCTGGTGGGATTCCTTCCCTGCTTTGGATTTTAGCTTT 16051 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 | || || ||||| || ||| | || | |||||| || ||||| ||||| Sbjct 16052 GATTGAATCAACAGTATCCGAGGGATCTCCATCCACAACAATAGTTTTTCCAGTTAGTGT 16111 Query 104542 TTTTACAAATATCTGCAT 104559 || || || | ||||| Sbjct 16112 CTTAACGAAAAGTTGCAT 16129 Score = 107 bits (118), Expect = 4e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || |||||||| ||||| || || ||||| ||| | || || |||| || || |||||| Sbjct 15477 GTTGATTCTTTTTGAATGTTGTACTCAGAGAGAATCCTTCCATCTTATAATTATTTTCCT 15536 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || |||| || || |||||| || ||| ||||||| || | || || || | ||| Sbjct 15537 GCGAAAAGGAGTCTTTGTTGACATGGTGGTGTTCCTTCCTTGGCATGGATTTTAGGTTTG 15596 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| || || ||||| || || || |||||||| || ||||||||||| Sbjct 15597 ACTGAATCTACAGTGTCTGATGGTTCAACATCAAGAGTAATAGTTTTCCCAGTAAGTGTC 15656 Query 104543 TTTACAAATATC 104554 | ||||| ||| Sbjct 15657 TGAACAAAGATC 15668 Score = 104 bits (114), Expect = 5e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 104329 TATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTC 104388 ||||||||| | ||||| | | ||| | ||| || ||||| || ||||||||||| Sbjct 15671 TATTCCCCCCAACAATCTAAGAGCCAAATGAATTGTTGACTCTTTTTGGATATTATAGTC 15730 Query 104389 AGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGG 104448 | | || | | |||||||| || ||| | ||||||| | || | | ||||||||| Sbjct 15731 ATAAAGTGAAAATCTGTCTTCTAATTATTTACTAGCAAAAGTGAGTTTTTATTGATCAGG 15790 Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 15791 TGGGATTCCTTCCTTTTCTTTAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTC 15850 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || || ||||| | ||| |||| || |||| |||| Sbjct 15851 AACATCAAGAGTGATTGTTTTTCCAGTTAATGTCTTTATGAAAATCTACATT 15902 >seq2 Length=701642 Score = 145 bits (160), Expect = 2e-29 Identities = 175/237 (74%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || || | ||||| || | ||| |||||||| |||||||| ||||| Sbjct 527681 ATTCCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCT 527622 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| |||||||||| || ||||||||| ||||| || || | || ||| || Sbjct 527621 GAGAGTGTTCTTCCGTCTTCTAATTATTTTCCAGCGAAAATAAGTCTTTATTAATCGGGT 527562 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| || || || ||||| || || | || || ||||| Sbjct 527561 GGGATTCCTTCTTTATCTTGGATTTTAGCTTTGACTGCATCAATTGTGTCTGATGGTTCA 527502 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT--TTTGT 104564 || || || || || || || || || | ||| ||||| || || | ||| ||||| Sbjct 527501 ACATCAAGAGTGATGGTTTTTCCTGTCAATGTCTTTACGAAAATTTACATGGTTTGT 527445 Score = 136 bits (150), Expect = 9e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| || || | ||||| || | ||| |||||||| |||||||| ||||| Sbjct 528631 ATTCCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCT 528572 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||||| || |||||| || || || || || | || ||| || Sbjct 528571 GAGAGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGT 528512 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||||||||| || || || ||||| || || | || || ||||| Sbjct 528511 GGGATTCCTTCTTTATCTTGGATTTTAGCTTTGACTGCATCAATTGTGTCTGATGGTTCA 528452 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || || || || || | ||| ||||| || || ||||| || Sbjct 528451 ACATCAAGAGTGATGGTTTTTCCTGTTAATGTCTTTACGAAAATTTGCATATT 528399 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| || || | ||||| || | ||| |||||||| |||||||| ||||| | Sbjct 528857 TTCCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCTG 528798 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 | || ||||| || ||||||| || |||||| || || || || || | || ||| || | Sbjct 528797 AGAGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGTG 528738 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 | ||||||||||| || | || || ||||| ||| || | || || |||| | Sbjct 528737 GGATTCCTTCTTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTT-AA 528679 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || || || || ||||||||||| | ||| || || || || | |||| Sbjct 528678 CGTCAAGAGTGATGGTCTTACCAGTCAATGTCTTGACGAAGATTTACATT 528629 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| ||||| || || | || | ||| | ||| |||||||| |||||||| ||||| | Sbjct 527908 TTCCACCTCTAAGTCTCAACACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCTG 527849 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 | || ||||| || ||||||| || |||||| || || || || || | || ||| || | Sbjct 527848 AGAGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGTG 527789 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 | ||||||||||| || | || || ||||| ||| || | || || ||||| | Sbjct 527788 GGATTCCTTCTTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTTCAA 527729 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | || || || || || || || || | ||| || || || || | |||| Sbjct 527728 CATCAAGAGTGATGGTTTTTCCTGTCAATGTCTTGACGAAGATTTACATT 527679 >seq753 Length=230 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||||| |||| || | ||| ||||| || |||||||| |||||||| Sbjct 14 TCCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGA 73 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| || |||||||||||||| || || | |||||| || || Sbjct 74 GAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGG 133 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 |||||||| || || | ||| || ||||| || || | ||||| ||||| || Sbjct 134 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAAC 193 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || || || || || || ||||| ||||| || || Sbjct 194 ATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAAC 229 >seq760 Length=219 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 206 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 147 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| |||||||||| || |||||||||||||| || || | |||||| || Sbjct 146 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 87 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| || || | ||| || ||||| || || | ||||| ||||| Sbjct 86 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 27 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || || || || || || ||||| Sbjct 26 ACATCAAGAGTGATTGTTTTTCCAGT 1 >seq751 Length=235 Score = 127 bits (140), Expect = 5e-24 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| | ||||| |||| || | ||| ||||| || |||||||| |||||||| Sbjct 167 TCCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGA 108 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || ||||| |||||||||| || |||||||||||||| || || | |||||| || || Sbjct 107 GAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGG 48 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTAC 104484 |||||||| || || | ||| || ||||| || Sbjct 47 GATTCCTTCCTTGTCTTAAATTTTAGCTTTGAC 15 >seq725 Length=304 Score = 122 bits (134), Expect = 2e-22 Identities = 150/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 104337 CTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAG 104396 |||| | || || |||| || | ||| ||||| || |||||||| |||||||| || | Sbjct 304 CTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGAGAGTG 245 Query 104397 TTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTC 104456 |||| |||||||||| || |||||||||||||| || || | |||||| || || |||| Sbjct 244 TTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGGGATTC 185 Query 104457 CTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTA 104516 |||| || || | ||| || ||||| || || | ||||| ||||| || || | Sbjct 184 CTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACATCAA 125 Query 104517 GTGT-AATAGTCTTACCAGTAAGT 104539 | || | | || || ||||| ||| Sbjct 124 GAGTGACTTGTTTTCCCAGTGAGT 101 >seq777 Length=200 Score = 96.9 bits (106), Expect = 8e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| ||||| | || || |||| || | ||| ||||| || |||||||| |||||| Sbjct 113 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 54 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 || || ||||| |||||||||| || |||||||||||||| || || | ||| Sbjct 53 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151386937469116