Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq72 82.4 5e-11 >seq72 Length=205853 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 || ||||| | |||||||| ||| || | |||||| ||||| | || | | | Sbjct 194165 ATATTACCCATATCACCAACATGACGATTTTCATCTAAAGGTCCTGCATGATTAGTTCCA 194224 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 || ||||||||||| ||||| | ||| ||||||||| | |||||||||||||||| Sbjct 194225 AATGGATTAAAATGAGGTCCAGCTGTTGTGCATCCATTGCTTAAATCTCCAAATTCATGT 194284 Query 42632 ATATGAAAACCGTGA 42646 ||||| || || ||| Sbjct 194285 ATATGTAATCCATGA 194299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347366310518441