Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq38 111 2e-19 >seq38 Length=305773 Score = 111 bits (122), Expect = 2e-19 Identities = 130/173 (75%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 126587 ATTACGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTT 126645 |||| | || ||| ||||||| || ||||||||| | || |||| | |||| || |||| Sbjct 201109 ATTAAGAATTCCATAAATTGGTGATAAATTTTGTAGTAGACATGGAC-AAAAGGGTACTT 201051 Query 126646 GTGGTATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATA 126705 ||||||||| ||| | |||||||| | || ||||| | | ||||| | || ||| Sbjct 201050 GTGGTATGACTTACAGATAAGAAGATCTTCCATTTACTTTAACTGGTATTTCACCAGATC 200991 Query 126706 TTATAATTAATCCAAATTGTATACCGTCAAGAATGACCATAAATCAAATAATT 126758 ||| ||||||||| ||||||| || ||||||||||| || | | |||||| Sbjct 200990 TTACTATTAATCCACATTGTATTCCATCAAGAATGACTATTGGTAATATAATT 200938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658396805258920