Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq10 228 1e-54 seq2 141 2e-28 seq6 120 5e-22 seq753 107 3e-18 seq760 102 1e-16 seq725 91.5 3e-13 seq72 86.0 1e-11 >seq10 Length=460275 Score = 228 bits (252), Expect = 1e-54 Identities = 524/792 (66%), Gaps = 24/792 (3%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 ||||| ||| ||| ||| || ||||||| ||||| |||||||||| | || || | Sbjct 100881 TTTTTAGTAATCACCTACTCTTCTTTCGAAGAAGTTGGTTTTTCCTTAGAGGGAAATCAT 100940 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA 38950 || ||| | || || ||||| || ||| || || ||| | ||| | | || Sbjct 100941 ATCCATCCACTCGAAAGGATTCTTCACATTGAAA-ATCTTTGGAGCACCAAGAGCGAAAA 100999 Query 38951 TAA-TCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009 | | |||||| || |||||||||| |||||| ||| | | ||||||| || | || Sbjct 101000 TTAGTCTATCAGCAACAAATTCAATGTATTGTTTCATGAGTGTTGAATTCATTCCAATTA 101059 Query 39010 ATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatta 39069 ||| | ||||||||| ||| ||| ||||| ||||| || | ||||| | | || Sbjct 101060 ATTCTACTGGTAATGCTTCACTAATGAATTCCTTTTCAATAGCAACAGCA-GATGAA--- 101115 Query 39070 tcataatt--at--attattt--tttgataatttatatttaatatgattcgcatataGTA 39123 |||||| || ||| ||| || |||| ||||| ||||| || || |||| Sbjct 101116 --ATAATTTCATGGATTCTTTGATTGGATAGTTTATTGACCATATGCTTG---TAGAGTA 101170 Query 39124 AACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTA 39183 |||| |||||||| |||||||| ||||| || || ||||| |||||||| || |||| Sbjct 101171 AACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGATATCAATTCATTGGAGAATGTTA 101230 Query 39184 ATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGA 39243 ||||||||| | | ||||||||| | |||||| || | |||| || ||| |||| Sbjct 101231 GTCCTGGCATAAGTGATCTCTTTTTGATCCAAAAAATGGCACAAAAAGAACCAGAGAAGA 101290 Query 39244 ATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAAT--TTATCATC 39301 | || || || ||| || || || |||| |||| | |||| | ||| ||||||| Sbjct 101291 AGATGCCTTCAACAGCAGCGAAAGCAATTAGTCTTTCAGCAAA--TGAATCATTATCATT 101348 Query 39302 TAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 39361 | |||| || || ||||| ||| || |||| || ||| | ||| || || || Sbjct 101349 GA---TCCATTTCATTGCCCATGATGCCTTCTTTTGAATTACAGGCACATTGTCAATGGC 101405 Query 39362 TTTAAATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATA 39421 | | ||| | || |||||| Sbjct 101406 ATGGAGTAAGTAATTTTTTTCATTTTCATCAGTGATGTAAGTATCAATCAAGAGAGAATA 101465 Query 39422 CATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGA 39481 |||||||||||| | |||||| || |||| |||| ||| || || ||||||| Sbjct 101466 TGTTTCAGAATGTATATTTTCCATGGCAATTTAAAATCCATAGAAACATCTGGCTTCTGG 101525 Query 39482 ATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGC 39541 | |||||||| | | ||||| ||| |||| |||||| ||||| |||||| || Sbjct 101526 AATTTGAACTTCTGTACAGAATTGTTATGCTAAGTTCTCATTGACAATTCCATCACTGGC 101585 Query 39542 TGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCA 39601 || ||||| || || |||||||||||||| || ||||| | ||||| |||||||| Sbjct 101586 AGCAAAGAAAGCCAATACATATTTAATAAAGTGCTTTTCTTCTGACTTTAATTTTTCCCA 101645 Query 39602 AGATTCAAGATC 39613 | || |||||| Sbjct 101646 ATCTTTAAGATC 101657 >seq2 Length=701642 Score = 141 bits (156), Expect = 2e-28 Identities = 176/240 (73%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||||| |||||||| || | || | ||||| |||||| || ||| Sbjct 527681 ATTCCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCT 527622 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| ||| ||||| ||||| | ||| | || || ||| Sbjct 527621 GAGAGTGTTCTTCCGTCTTCTAATTATTTTCCAGCGAAAATAAGTCTTTATTAATCGGGT 527562 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| |||||| ||| || | || || ||||| | ||| Sbjct 527561 GGGATTCCTTCTTTATCTTGGATTTTAGCTTTGACTGCATCAATTGTGTCTGATGGTTCA 527502 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT--TTTATTAT 172077 || || ||||| |||||||| || || ||||| || | ||| || | ||| ||| |||| Sbjct 527501 ACATCAAGAGTGATGGTTTTTCCTGTCAATGTCTTTACGAAAATTTACATGGTTTGTTAT 527442 Score = 140 bits (154), Expect = 6e-28 Identities = 174/237 (73%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||||||||||| |||||||| || | || | ||||| |||||| || ||| Sbjct 528631 ATTCCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCT 528572 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | | || || |||| ||| || || || || | ||| | || || ||| Sbjct 528571 GAGAGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGT 528512 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| |||||| ||| || | || || ||||| | ||| Sbjct 528511 GGGATTCCTTCTTTATCTTGGATTTTAGCTTTGACTGCATCAATTGTGTCTGATGGTTCA 528452 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT-TTTATT 172075 || || ||||| |||||||| || |||||||| || | ||| || ||||| |||||| Sbjct 528451 ACATCAAGAGTGATGGTTTTTCCTGTTAATGTCTTTACGAAAATTTGCATATTTATT 528395 Score = 120 bits (132), Expect = 5e-22 Identities = 164/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||||||||||| |||||||| || | || | ||||| |||||| || ||||| Sbjct 528855 CCACCTCTAAGTCTCAATACTAAGTGGAGTGTTGATTCTTTTTGAATATTGTAGTCTGAG 528796 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || |||| ||| || || || || | ||| | || || ||||| Sbjct 528795 AGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGTGGG 528736 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||||||||| |||| |||||| ||| ||| | || || ||||| | || || Sbjct 528735 ATTCCTTCTTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTT-AACG 528677 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| ||||| |||||||| ||||| || | ||| || | |||| Sbjct 528676 TCAAGAGTGATGGTCTTACCAGTCAATGTCTTGACGAAGATTTACATT 528629 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||||||||||| || || ||||| | || | ||||| |||||| || ||||| Sbjct 527906 CCACCTCTAAGTCTCAACACCAAATGAAGTGTGGATTCTTTTTGAATATTGTAGTCTGAG 527847 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | | || || |||| ||| || || || || | ||| | || || ||||| Sbjct 527846 AGTGTTCTTCCATCTTCTAATTATTTTCCGGCGAAGATAAGTCTTTATTAATCGGGTGGG 527787 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||||||||| |||| |||||| ||| ||| | || || ||||| | ||| || Sbjct 527786 ATTCCTTCTTTGTCTTAGATTTTAGCTTTGACAGCATCAATTGTGTCTGATGGTTCAACA 527727 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| |||||||| || || ||||| || | ||| || | |||| Sbjct 527726 TCAAGAGTGATGGTTTTTCCTGTCAATGTCTTGACGAAGATTTACATT 527679 >seq6 Length=529034 Score = 120 bits (132), Expect = 5e-22 Identities = 153/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 171864 AAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAG--ATCGTTCGTCATCCA 171921 ||||| | || | |||||| |||||||| || |||||| | | ||| || | Sbjct 15696 AAATGAATTGTTGACTCTTTTTGGATATTATAGTC--ATAAAGTGAAAATCTGTCTTCTA 15753 Query 171922 ATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTA 171981 ||| ||||| ||||||| | | | | | ||| |||||||| |||||||| || |||| | Sbjct 15754 ATTATTTACTAGCAAAAGTGAGTTTTTATTGATCAGGTGGGATTCCTTCCTTTTCTTTAA 15813 Query 171982 TTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 ||||| ||| || | ||||||||||| | ||| || || ||||| || ||||| | Sbjct 15814 TTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACATCAAGAGTGATTGTTTTTC 15873 Query 172042 CAGTTAATGTTTTAATGAATATCTGCATT 172070 |||||||||| || ||||| |||| |||| Sbjct 15874 CAGTTAATGTCTTTATGAAAATCTACATT 15902 Score = 116 bits (128), Expect = 7e-21 Identities = 137/184 (74%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || ||||| | | || | |||| | |||| || |||||||||| || ||| Sbjct 9704 AATATTGTAGTCTGAGAGTGTTCTTCCGTCTTTTAATTACTTTCCAGCAAAAACTAGTCT 9763 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 | ||| || || || |||||||||| ||||| |||||| ||| || | ||||| Sbjct 9764 TTTTTGATCGGGGGGGATTCCTTCTTAGTCTTG-ATTTTAGCTTTGACTGCATCAATAGT 9822 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| | ||| || || || || || ||||| ||||||| ||| |||||||| |||| Sbjct 9823 ATCTGATGGTTCAACATCAAGGGTGATTGTTTTTCCAGTTAGTGTCTTAATGAAAATCTA 9882 Query 172067 CATT 172070 |||| Sbjct 9883 CATT 9886 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || | ||||| || | || | || || |||||| || || || Sbjct 10644 CCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGAG 10703 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||||| Sbjct 10704 AGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGGG 10763 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| ||| || | ||||||||||| | ||| || Sbjct 10764 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACA 10823 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| || ||||| ||||| | ||| |||| ||| || | |||| Sbjct 10824 TCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 10871 Score = 114 bits (126), Expect = 2e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 10869 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 10928 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||| Sbjct 10929 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 10988 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 10989 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 11048 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || ||||| || ||||| ||||| | ||| |||| ||||| | ||| || Sbjct 11049 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATGTT 11101 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || | ||||| || | || | || || |||||| || || || Sbjct 11626 CCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGAG 11685 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||||| Sbjct 11686 AGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGGG 11745 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| ||| || | ||||||||||| | ||| || Sbjct 11746 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACA 11805 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| || ||||| ||||| | ||| |||| ||| || | |||| Sbjct 11806 TCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 11853 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 11851 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 11910 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||| Sbjct 11911 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 11970 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 11971 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 12030 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || ||||| || ||||| ||||| | ||| |||| ||||| | |||| Sbjct 12031 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATT 12081 Score = 114 bits (126), Expect = 2e-20 Identities = 165/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 12306 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 12365 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||| Sbjct 12366 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 12425 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 12426 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 12485 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || ||||| || ||||| ||||| | ||| |||| ||||| | ||| || Sbjct 12486 ACATCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACAAATATTTACATGTT 12538 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || | ||||| || | || | || || |||||| || || || Sbjct 14406 CCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGAG 14465 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||||| Sbjct 14466 AGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGGG 14525 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| ||| || | ||||||||||| | ||| || Sbjct 14526 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACA 14585 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| || ||||| ||||| | ||| |||| ||| || | |||| Sbjct 14586 TCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAACGAAAATTTACATT 14633 Score = 111 bits (122), Expect = 3e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 12079 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 12138 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||| Sbjct 12139 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 12198 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 12199 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 12258 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || ||||| || ||||| ||||| | ||| |||| ||| || | |||| Sbjct 12259 ACATCAAGAGTGATTGTTTT-CCAGTGAGTGTCTTAACGAAAATTTACATT 12308 Score = 105 bits (116), Expect = 1e-17 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 171879 TCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAA 171938 ||||||| ||||||||| || | | | || | | || |||| || ||||||||| Sbjct 9923 TCTTTAGCAATATTATAGTCAGGGAGTGTTCTTCCACTTTCTAATTACTTTCCAGCAAAA 9982 Query 171939 ATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 171998 || | ||| | ||| || ||||| |||||||| || | ||| |||||| ||| || | | Sbjct 9983 ATGAGTCTTTATTGATCGGGTGGGATTCCTTCCTTTTGTTGGATTTTAGCTTTAAC-TGA 10041 Query 171999 GT-TATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 172057 || |||||||||| | | | || || ||||| || ||||| |||| | ||| ||||| Sbjct 10042 GTCAATAGTATCTGTTGGTACAACATCAAGAGTGATAGTTTTTCCAGCGAGTGTCTTAAT 10101 Query 172058 GAATATCTGCATTTT 172072 ||||| | |||||| Sbjct 10102 AAATATTTACATTTT 10116 Score = 104 bits (114), Expect = 4e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 14631 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 14690 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAA-TCTCTGTTGGTCAGG 171958 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || || Sbjct 14691 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATAGAGTCTTTATTGATCGGG 14750 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 ||| |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 14751 TGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTC 14810 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || ||||| || ||||| ||||| | ||| |||| ||||| | ||| || Sbjct 14811 AACATCAAGAGTGATTGTTTT-CCAGTGAGTGTCTTAACAAATATTTACATGTT 14863 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | ||||||| | || || | || | ||||| ||||||||| || Sbjct 15900 ATTCCTCCTCTCAATCGTAATGCCAAGTGAAGTGTTGATTCTTTTTGAATATTATAGTCA 15959 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || |||| ||||||||||||| || ||| | ||| || ||| Sbjct 15960 GAGAGTGTTCTCCCGTCCTCTAATTACTTACCAGCAAAAACTAGTCTTTATTGATCTGGT 16019 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| | ||| |||||| ||| | | | |||||| || | ||| Sbjct 16020 GGGATTCCTTCCCTGCTTTGGATTTTAGCTTTGATTGAATCAACAGTATCCGAGGGATCT 16079 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || | | ||| ||||| ||||||| ||| |||| ||| | ||||| Sbjct 16080 CCATCCACAACAATAGTTTTTCCAGTTAGTGTCTTAACGAAAAGTTGCAT 16129 >seq753 Length=230 Score = 107 bits (118), Expect = 3e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 |||||||| | || | ||||| || | || | || || |||||| || || || Sbjct 15 CCACCTCTCAATCTAAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCAGAG 74 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||||| Sbjct 75 AGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGTGGG 134 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 |||||||| || |||| |||||| ||| || | ||||||||||| | ||| || Sbjct 135 ATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCAACA 194 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056 || ||||| || ||||| ||||| | ||| |||| Sbjct 195 TCAAGAGTGATTGTTTTTCCAGTGAGTGTCTTAA 228 >seq760 Length=219 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || ||||| | || || ||||| || | || | || || |||||| || || Sbjct 206 ATTCCTCCTCTCAATCTTAGAACTAAGTGAAGTGTTGATTCCTTTTGAATATTGTAGTCA 147 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | |||| || |||| || ||||||||||| | ||| | ||| || ||| Sbjct 146 GAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCTTTATTGATCGGGT 87 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| || |||| |||||| ||| || | ||||||||||| | ||| Sbjct 86 GGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGTATCTGATGGTTCA 27 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 || || ||||| || ||||| ||||| Sbjct 26 ACATCAAGAGTGATTGTTTTTCCAGT 1 >seq725 Length=304 Score = 91.5 bits (100), Expect = 3e-13 Identities = 117/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || || || | | || | |||| || |||| || ||||||||||| | ||| Sbjct 264 AATATTGTAGTCAGAGAGTGTTCTTCCGTCTTCTAATTACTTTCCAGCAAAAATGAGTCT 205 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 | ||| || ||||| |||||||| || |||| |||||| ||| || | ||||| Sbjct 204 TTATTGATCGGGTGGGATTCCTTCCTTGTCTTAAATTTTAGCTTTGACTGCATCAATAGT 145 Query 172007 ATCTGACGATTCTACTTCTAGAGT-AATGGTTTTACCAGT 172045 |||||| | ||| || || ||||| | | ||||| ||||| Sbjct 144 ATCTGATGGTTCAACATCAAGAGTGACTTGTTTTCCCAGT 105 >seq72 Length=205853 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 239455 CATGGATTTCATATACACGAATATGGAGATTTAAGCAATGGTTGCACATCAGCTGGTGAA 239514 |||||||| |||||||| |||| |||||||||||||||||| |||||| ||||||| Sbjct 194298 CATGGATTACATATACATGAATTTGGAGATTTAAGCAATGGATGCACAACAGCTGGACCT 194239 Query 239515 CATTATAATCCTTTT 239529 |||| |||||| ||| Sbjct 194238 CATTTTAATCCATTT 194224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905127208866600