Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq38 113 6e-20 >seq38 Length=305773 Score = 113 bits (124), Expect = 6e-20 Identities = 126/166 (76%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 201570 ATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 201628 || ||| ||||||| |||||||||||| | || |||| | |||| || ||||||||||| Sbjct 201102 ATTCCATAAATTGGTGATAAATTTTGTAGTAGACATGGAC-AAAAGGGTACTTGTGGTAT 201044 Query 201629 GATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTATAAT 201688 || ||| | |||||||| | || ||||| | | ||||| | || ||| ||| || Sbjct 201043 GACTTACAGATAAGAAGATCTTCCATTTACTTTAACTGGTATTTCACCAGATCTTACTAT 200984 Query 201689 CAATCCAAATTGTATACCATCAAGAATGACCATAAATCAAATAATT 201734 |||||| ||||||| |||||||||||||| || | | |||||| Sbjct 200983 TAATCCACATTGTATTCCATCAAGAATGACTATTGGTAATATAATT 200938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655273635593000