Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paramecium_20caudatum_20[genbank_20GCA_5F000715435.1_202014-06-30] 777 sequences; 30,480,878 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 6e-13 >seq10 Length=460275 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/174 (72%), Gaps = 5/174 (3%) Strand=Plus/Minus Query 94744 ATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCGTTCCTTTGC 94802 ||||||||||| || ||||| ||||| ||| | || | || | ||| ||||| Sbjct 101384 ATTCAAAAGAAGGCATCATGGGCAATGAAATGGATCAATGATAATGA----TTCATTTGC 101329 Query 94803 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGC 94862 ||| |||| | || || || |||||| || ||||||||||||||||| || || || Sbjct 101328 TGAAAGACTAATTGCTTTCGCTGCTGTTGAAGGCATCTTCTTCTCTGGTTCTTTTTGTGC 101269 Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||| |||| |||| ||| || || |||||||| || |||||||| || Sbjct 101268 CATTTTTTGGATCAAAAAGAGATCACTTATGCCAGGACTAACATTCTCCAATGA 101215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255135079480